Pseudomonas fluorescens Pf0-1: Pfl01_5642
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Entry
Pfl01_5642 CDS
T00283
Name
(GenBank) putative regulatory protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfo03000
]
Pfl01_5642
Transcription factors [BR:
pfo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pfl01_5642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ABA77378
UniProt:
Q3K4C6
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All DBs
Position
complement(6321608..6322474)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPLELQR
AVTLMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAI
CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSVKALDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgctgcaacacatcgcccagtcacgtcacctgttacgcaagtcggagctcaag
gtcgccgaccacgtgctgcttgaccctgcggcggtgatgcacagttccatggccgacctg
gcccacagcgtcggcatcagcgagccgaccatcgtgcgcttctgccgggccattggttgc
tccggtttccaggatctgaaactcaagctcgcgcaaagcctcgcggccggcgccagcttc
ggtcagttcgcgatccatgaagacgattccgtcgccgactacagcctgaaaatcttcgac
accaccttgcacacgctgatggaggttcgcgaaaagctcgatcctctggagctgcaacgg
gcggtgacgctgatgtcccaggcccagcgcgtcgagttctatggttttggtgcgtcgggc
gcggtggcggcggatgcgcagcacaagttcttccgtctgctgctgacggcagcggcgtat
tccgacccgcacatgcaggcgatgtcggcggtgacgctgaagcccaccgacgtggcgatc
tgcatttcccagtccggccgctccaaagacctgctgatcaccgccaacctcgttcgcgag
agcggggcgtcgctgattaccttgtgcccgagccagacgccgctggccgagctgtcgacc
gtcaacctggcgatcgacgttcacgaagacaccgaaatctacaccccgttgacttcgcgt
atcgctcacctggtggtgatcgacgtattggcgatgggcgtggccatggcgcgcgggccg
agcctggtcaaccacctcaagagcgtcaagcgcagcctgcgcagcttgcggctgtcgcca
aaatcggtaaaagcgctggacgactga
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