Poecilia formosa (Amazon molly): 103129328
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Entry
103129328 CDS
T07984
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103129328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103129328
04121 Ubiquitin system [BR:
pfor04121
]
103129328
03036 Chromosome and associated proteins [BR:
pfor03036
]
103129328
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103129328
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103129328
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103129328
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103129328
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103129328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_5
Ank_4
Ank_3
zf-RING_5
zf-RING_10
PTCB-BRCT
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
103129328
NCBI-ProteinID:
XP_007540440
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MDNTTSLQTDDWKNTKEAVANFRRLLLCSKCSNVMEEPVCLGMCEHMLCRSCAGPRAGDG
CAVCLSPAWVKDIQINRQLSSIIQLFSDLESLLNPTEQADSSVAEVSSQAEAAVLKHKKN
FKIWFSPRSRKVRCKVEKPLEVTAPDRKSSEEQPAAQSKVPTAQCRDLSVFNFTSSSQDS
SSSQNERNVNSKGKKRTKKTATTRQVQGRTSTTRRQTKENLKKKRLEAINQQWGITDQQN
PSSGPEPSCADGARGSRKRVSFLSPSVSTDGAQTEASQVRELSLTNRTTNESLSGGEINV
LSHHSQHGQSTSSQMSSTNNPNPDDGSRTDTNGSPQESLSKRSKTVERNCSLETTPKRQR
ASSGQRRKSPGGKASPFTERLTLASPPSEKKKKRPREGKQRSPSVAALMSSDSHNKPVCS
PRSASGRSSPGSPAVMKRNHRGETPLHLAAIKGDVDSVKELLDQGADPNLKDNAGWTPLH
EACNLGHLGAVKVLVARGALLNTPGYENDSPLHDAVRNGHAAIVKLLLQLGASQNVLNLH
GKRPADYAVSQEMLAIFQEAAEGTQYANSHTSHSPSATISTSSESARRDQTLMLLASKLS
SPEQRQLVKLGVLLGGRIVDTFSGSVSHVVVPEGQMPTTYSTLLGLLAGCWVVKYSCKYE
VSC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggataataccacatcgctacaaacagatgactggaagaacactaaagaggcggttgca
aacttccgtcgactgttgctttgctccaaatgctcaaatgtgatggaagagccggtgtgt
ctggggatgtgcgagcatatgctgtgcaggtcgtgtgctggcccccgggcaggagacggc
tgcgccgtgtgtctcagccctgcgtgggtgaaggacatccaaatcaacaggcagcttagc
agcatcatacagctcttcagtgacttggagtccctgcttaatcccacggaacaagcagac
tcctctgttgctgaggtcagttcgcaggcggaggctgcagtcctaaaacacaagaagaac
tttaagatctggttcagtcctcgcagtcgaaaggtgcgctgcaaggtcgagaagccttta
gaggtcactgctccagacaggaagtcctctgaagaacagcctgctgctcagtccaaagtc
cccacagctcagtgccgggacctttcagtgtttaatttcacttcgtcctcccaagactct
tcgtcttcacaaaatgaaaggaatgtaaacagtaaaggaaagaaaagaactaagaaaact
gctactacaaggcaggttcaagggcgcaccagtaccacacgtagacagactaaagagaat
ttgaaaaagaagaggctggaggccataaaccagcagtggggaattacagaccaacaaaat
ccctcatctggaccagagccatcctgtgctgatggagcaagagggtcccgtaaaagggtt
tctttcttaagcccttctgtctcgactgacggggcccagactgaagcctcgcaggtccgt
gaactcagtttgaccaaccgcacaacaaacgaaagtctctcgggaggggagatcaatgtg
ctgagtcaccacagccagcatggtcagagcacatccagtcagatgtcgtcaacaaacaac
ccaaatccagatgacggttccagaacagacacaaacgggtctccccaggagagtctctcc
aaaagaagcaaaacagtggagagaaactgctccctggaaacgacgccaaaaagacagagg
gcttcttcaggccaaaggagaaaatcacctggtggaaaagcctcacctttcactgagcgt
ttaactttagcaagccccccaagtgaaaagaaaaagaaacgcccgagagaaggtaaacag
cgtagtccgtctgttgcagccctcatgtcttcagacagccacaataaacccgtgtgcagt
cctcggtcagcttccggccgttcaagccctggcagccctgcagtaatgaagaggaaccac
agaggagagacccctctacatcttgctgcaataaagggagatgtagattctgtcaaagaa
cttctggatcagggagccgaccccaacctgaaagataacgccggctggacaccactgcat
gaggcatgtaatctgggccacctgggagctgtgaaggtcttggttgcgaggggagccctg
ttgaacacacctggctatgaaaatgattctccgctccatgatgctgtgaggaatggacat
gcagccattgttaagctgctgctgcagctcggtgcctcacagaacgttcttaatctacat
ggaaagcgtcctgcagattacgcagtgagccaggagatgctggcgattttccaggaagct
gcagaaggaacccaatatgctaattctcatacatctcatagcccctcagccactatctcc
acgtcgagtgagagtgcgagaagggatcagactttgatgttattggccagcaagctatca
tcgcctgagcagcgtcagctagtcaaactgggagtgctactgggaggaaggatcgttgat
accttttctggctcagtgagccatgtcgtcgtgccagaaggacaaatgcccaccacctac
tccaccctcctgggtcttcttgctggctgctgggttgtcaaatacagctgtaagtatgaa
gtgagctgctga
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