Poecilia formosa (Amazon molly): 103130295
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Entry
103130295 CDS
T07984
Symbol
crocc
Name
(RefSeq) rootletin isoform X4
KO
K16469
rootletin
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pfor03037
]
103130295 (crocc)
Cilium and associated proteins [BR:
pfor03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103130295 (crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
FKBP15
APG6_N
Motif
Other DBs
NCBI-GeneID:
103130295
NCBI-ProteinID:
XP_007541708
Ensembl:
ENSPFOG00000018061
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MSGEKNSDSNKLESVIQRLEESVLSEEKRLTVRGPSPDAAPTCLPARVREIVTKNLNDTT
GAMSSVMSVQEENRVLQGELARLEDLLAHSRADRDELAIKYGAISERLEQALRLETGEGD
LDSPESRSLAQQNVDLRRRLDEEQAAYRRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKCG
DLEQMLQEKSSEVEKGTVGSNSETSNGRHQEDVSSNLEEALIRLEEEQQRSSSLSAVNAM
LREQLEQAGLANEALSQDIRRLTVDWTKAREELEQKESDWRREEESFHSYFSSEHGRLLK
LWRQVVGFRRHVCEMKSATERDLSEMRSELARMSHSARVSCSGLSTSVDSRAAGEKALRV
QLEQQLRERAAEMMSLQSRAEAEKSELNVRLSDVVRECERLKGQIVERDAEISTLTQRFE
EQSGSDEPDTQLIKAQSEMLLDTLRDIAQSVLSDGESSSEADQDRSAAPLLALIRDASAR
RSSSPLKMATAPPASSPSPLPDAALSALRSAVANKTLQLQDVRGRLLSAQSSVQQLRKQL
SDSDSSRRDSEQRNQALQRERDAAQRERENAQKEKDRLKQDRDALASEKAKLEQSVQAAE
SSVQMLQMEREKLQLALLAAQRERDGEREEKEAANQERDRAKAETQRIQKQRDLSESRAS
AQRGELSAVRESHQQGEVERQLLQREKAQLSEALARAESCSTELSLQLSRLQSEEAALRD
SLAKMGGMNEALAQDKVDLNNYILQLEEEKRVLLAQRREAEQERLTIRDELVRLEQDRLE
LDAGRVALQQALQDAEQSRAGTESELQSLRAERLRLQQKVTQLCAEVASLGSELSLAQGE
GQKNEAALEEAGRGRADLARDKAALVVQLTASERENSALSEELAAFRSERESLETGLFEA
QQQLALVESRRDQLEAENQALSARCETAAAELKRLRSDDAIALAQAEREKQTLTQSLGAA
QLEAQQALRKAISEHQEEVERLVSEKEVVRHSLQMEQEAALRRCRQEMDDQQQRAKRDRE
ELQEQLSALQHDRDQSLLQAETEKQQALSLKEAEKAVLCDRVSGLQAELSAAALEAERTA
REAAQLKEQEQIRVGALTSELLELRSRLDEATSAHQRELHALQELCTDLRSRADVALKEL
EQCRASLSAAEESRDQVRRSLLEAERRLSQTQEASENCRRDAAEQRRALSDITKERDALS
QSNTQLRGTLRSAETERISVKRQCEEKEQRLAVLEENLSSSQKEVTELRSCLREVERSRL
EARRELQELRRQLKVVDAEKEQRGREVAELQTRLVLEEQREEERGKEVFSLKQKLAEAET
ARESIKKELALTQRRLTESESGWRSCERELTAQLQDARGCEKKLQDEAKNLSLRAQAAHD
AAALSGLQLSEAQGRLAATEAELTRAEAARRDLEFRLSGLQSALTRTLGIGASGRGCRGR
SPGSSSTSPGSVSRHHSISPLRSSLSPPKEFRGSTPDNTLGSGAVSPERGDTPLPQSELD
PDSLRSGLRDFLQELRDAQRERDDARCQLGVLQRELEELKGERGSAQSRFSLLQSSLQEL
QEVRRGLDERLTTTQILLQQQEEAVRRGDRDRRALSDRVKELERSLQSSEADKKHTQDQL
NKQRAAEARLEAERKRLREALEAAEARATRVELGRRSLEGELQRLKLSLGDREAESQTSQ
QRHDALIKQVAEKEARVSQLQRDVDSLSQNLLKAQEGESALKEKAASLSQTLQEVTASHS
GTQSRLLALQKTLGLAEQDKRLLQERLDEARAALAEGKRNMAALTERMQNLQSELSQSEL
RREELEAELSSTQEALRQRSATLVEAQRSAQQVQTERAVVEERLRALQRAVALLETEKKD
AERQAVRLEKDKNALRNTLDKVERQKLKSEEGSMRLSAERSRLDRSLNTAEQELQEAQQQ
ILMLQTQLADMEHSHSLCESLVQQRDEVQREAEKMRSSLRDAERTLGTRERAHRHRVKGL
EEQVSTLKEQLQQEIKRRQPSLPASLLSK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgagaaaaactccgactccaacaagctggagtcggtgatccagcggctggag
gagagcgtcctgtctgaggagaagaggctgaccgtcaggggcccgtcaccggatgcggcc
cctacatgtctgccggccagagtccgagagatcgtcaccaagaacctcaacgataccact
ggggccatgtcctccgtcatgtccgtccaggaggagaaccgggttctgcagggagagctg
gcccggctggaggacctgctggcccacagcagagccgaccgggacgagctcgccatcaag
tacggcgccattagcgagaggctggagcaggcgctgcggcttgaaaccggggagggcgac
ctcgactcgcccgagtcgcgcagcctggcccagcagaacgtggacctgcggcgacggctg
gacgaggagcaggcggcctacaggcgtaaacttaccgcctaccaggagggccagcaaagg
caggcgcagctggtgcagaagctgcaggcgaaggttctgcagtacaaaaagaaatgtggc
gatctagagcagatgcttcaggagaaatcctccgaggtggagaaaggcacggtgggtagc
aacagcgaaacgtcaaacggacgacatcaggaagacgtgagcagcaacctggaggaagct
ttgatccggctggaggaagagcagcagaggagcagcagcctgtcggcagtgaacgcgatg
ctgcgggagcagttggagcaggcgggtttggccaacgaggctctgagccaggacatccgc
aggctcaccgtggactggaccaaagcccgggaggagctggagcagaaggagtcagactgg
aggagagaggaggagtctttccacagctacttcagcagcgaacacggccggctgctgaag
ctgtggaggcaagtggttggcttcaggaggcacgtctgcgagatgaagagcgccaccgaa
agagacttgtcagaaatgcgatctgagctggcccggatgtcccactcggcccgggtgtcc
tgctctggattgtccacgtcggtggacagtcgggcggcgggagaaaaggctctgagggtt
cagctggagcagcagctgagggagcgagcggcggagatgatgagccttcagagcagagcc
gaagcagagaaaagtgagctcaacgtcaggttgtctgacgtggtgcgagaatgtgagaga
ctgaagggacaaattgtggagcgagacgcagaaatctccactctgacgcagaggttcgag
gagcagagtggcagcgatgagcccgacacgcagctgattaaagctcagtctgagatgctg
ctggacacgctgagagacatcgctcagagcgtgttgtcagacggggagtcgtcgtcagaa
gccgaccaggatcgctctgcggccccgctcctggcgctgatccgtgacgcctctgctcga
cggtcctcctctccgttaaagatggcgaccgctcctccggcctcctcgccgtctccgctg
cctgacgcagctctgtccgctctccgctcagccgtcgcaaacaagacgctgcagctacag
gacgtccgcggccgtctgctctctgcccagtcgtccgtccaacagcttcgaaagcagctt
tcagactccgattcgtccagacgagactcggagcagcggaaccaggcgctgcagcgggaa
agagacgcagctcagcgagagagagagaacgcccagaaagagaaggaccgtctgaagcag
gaccgggacgcgctggccagcgagaaggcgaagctggagcagagcgtccaggcagcggag
agcagcgtccagatgctgcagatggagcgcgagaagctgcagctggcgctgctggcggct
cagcgagagcgagacggcgagagggaggagaaggaggcggccaatcaggagagagaccgg
gccaaagctgagacccagaggatacagaagcagcgggatctgagtgagagccgagcatcg
gctcagagaggagagctgtctgcagtgagggagagccaccagcagggggaggtagagagg
cagcttctgcagcgcgagaaggcccagctgtccgaagcgctggctcgggccgagagctgc
agcactgagctgtcactgcagctcagcaggctgcagtctgaggaggcggcgctcagggac
tctctggcaaagatgggcggcatgaacgaggcgctggcccaggacaaggtggacctcaac
aactacatcctccagctggaggaggagaagcgcgtcctgctggctcagcgccgcgaggcg
gagcaggagcggctgaccatcagggacgagctggtccgtctggagcaggaccggctggag
ctggacgccggccgcgtggcgctgcagcaggcgctgcaggacgccgagcagagccgggcc
gggacggagagcgagctgcagagtctcagagcggagaggctgcggctgcagcagaaggtg
acccagctttgtgccgaggttgcgtctctgggctcggagctgagcctggcccagggggag
ggacagaagaatgaggcggcgctggaggaggcgggccgcggtcgggcggatctggcccgg
gacaaagcggctctggtggtccagctgacggcgtctgaaagagagaactcggcgctgtca
gaggaactggctgctttcaggtctgagcgggagtccctggaaacgggtctgtttgaggcg
cagcagcagctggcgctggtcgagtcccgcagagatcaactggaggccgagaaccaagcg
ctgagcgcccgctgcgagacggccgcagctgagctgaagcggttgcgctcagacgatgcg
atcgccctggcgcaggcagagagagagaagcagactctaactcagtccctcggcgccgcg
cagctggaggctcagcaggctttacgcaaggccatctccgagcatcaggaggaggtggag
aggctggtctcagagaaggaagtggtgcgtcacagcttgcagatggagcaggaagcagct
ctgaggcgctgcaggcaggagatggacgaccagcagcagagagcgaagagagacagagag
gagctgcaggagcagctgagtgctctgcagcacgaccgagaccagagtctgctgcaggcc
gagacggagaaacagcaggcgctctcgctgaaggaggcggagaaggcggtgttgtgtgac
agagtgtcgggtctgcaggcggagctgtcggctgcagctctggaggccgagcggacggcc
agagaagcagctcaactcaaagagcaggagcagatcagagttggcgctctgaccagtgag
ctgctggagcttcgctctcggctggacgaggcgacgtcggctcatcaaagggaactccac
gctctgcaggaactctgcaccgatctgcgctcgcgagccgacgtcgctctcaaagagttg
gagcagtgcagagcttctctgtcggcggcggaggagagccgagaccaggtgaggcggagc
ctgctggaggccgaacgccgtctgagccagacccaggaggcgtcggagaactgcaggagg
gacgcggcggagcagcggcgtgccctcagtgacatcacgaaggagagggacgctctgagc
cagtccaacactcagctgagaggaacgctgcgcagcgcggagacggagaggatcagtgtg
aagcggcagtgtgaggagaaggagcagaggctggctgtgctggaggagaacctgtcgtcg
tctcagaaggaagtgaccgagctgcgcagctgtctgagagaggtcgaaaggtcgcgcctg
gaggctcggcgggagctgcaggagctccgcaggcagctgaaggttgtagatgcagagaag
gagcagagagggagggaggtggcagagctgcagactcgtctggttctggaggagcaaaga
gaggaggaacgtgggaaggaggtcttctccctcaagcagaagcttgctgaagctgaaaca
gccagagagtccatcaagaaggagctcgccctgacccagaggcgtctgacggagtccgag
tccggctggcgcagctgtgagagagagctgacggctcagctgcaggacgcccgcggctgc
gagaagaagctccaggacgaagccaagaacctgtcgctgcgcgctcaggccgcccacgac
gccgccgccctgtctggcctgcagctgagcgaggcgcagggccggctggccgccaccgag
gccgagctcacccgggccgaggccgccaggagggatctggagtttcggctgagcggcctc
cagtcggcgctgacccggacgctgggcatcggggccagcggcaggggctgcagggggcgg
agtccgggaagcagctccacgtcaccgggcagcgtgtcgcgccaccacagcatctcgccg
ctgcgctcctcactgtcgccacctaaagagtttcgaggaagcacgccggacaacacgctg
ggttctggtgctgtttctccagagagaggcgacacgccgctgcctcagtctgagctcgac
ccagattccctgagaagtggcctcagagatttcctccaggagctacgggacgcacaaaga
gaaagggatgacgctcgctgccagctgggggtcctgcagcgggagctggaggagctgaag
ggggaacgtggctctgctcagagccgcttctctctgctgcagagctctttgcaggagcta
caagaagtgaggcgtgggctggatgagcgtctgaccaccactcagatcctgctacagcag
caggaggaggcggtgaggagaggagacagagacaggagagccctctccgaccgggtgaag
gagttggagcgatcgctgcagtcctcagaggcggataagaagcacacccaggatcagctg
aacaagcagcgggccgccgaggcgcgtctggaggcggagaggaagcgcctgcgggaggcg
ctagaggcagccgaggctcgggccaccagggtggagctggggaggcgcagcctggagggg
gagctgcagagactcaagctgagtctgggggaccgtgaggccgagagccagacgtcccag
cagcgccacgacgctctgatcaaacaggttgcggagaaagaagcacgtgtttcccagctg
cagagggacgtcgacagcctgagtcagaacctgctgaaagctcaggaaggtgaatctgct
cttaaggaaaaggccgcctccctcagccagaccctccaggaggtgacggcctcccacagc
ggcacgcagagccgcctgctcgccctgcagaagacgctcggcttggctgagcaggacaag
aggctcctgcaggagcgactggatgaagcacgggcagcgctggctgaagggaagagaaac
atggctgcccttactgagcgcatgcagaacctgcagagtgagctgagccagagcgagctg
cggcgagaagagctggaggccgagctcagcagcacccaggaggctctgcgccagcggtcg
gccacccttgtggaggcccagcggagcgcccagcaggtccagacggagcgggccgtcgta
gaggagcggctgcgcgcgctgcagagggcggtggctctgctggagacggagaagaaggat
gcagagaggcaggcggtcaggctggagaaagacaagaacgcactgaggaacacgctggat
aaggttgaacgtcagaagctgaagtccgaggagggcagcatgcggctttctgcagagagg
agccgtctggatcgctcgctgaacacggcagagcaggaacttcaggaagcgcagcagcaa
atactgatgctgcagacgcagctggctgacatggagcactcacacagcctgtgtgagagt
ttggtgcagcagcgtgacgaggtccagcgggaggccgagaagatgaggagcagcctccgg
gatgcggagcggacgctgggcaccagggagcgagctcaccgccaccgggtcaaaggcctg
gaggaacaggtttccacgctgaaggagcagctgcagcaggagattaagcgacggcagccg
tctctcccggcatcgctgctgtccaaatga
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integrated database retrieval system