KEGG   Poecilia formosa (Amazon molly): 103134947
Entry
103134947         CDS       T07984                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
pfor  Poecilia formosa (Amazon molly)
Pathway
pfor03030  DNA replication
pfor03410  Base excision repair
pfor03420  Nucleotide excision repair
pfor03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103134947 (rfc5)
   03410 Base excision repair
    103134947 (rfc5)
   03420 Nucleotide excision repair
    103134947 (rfc5)
   03430 Mismatch repair
    103134947 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfor03032]
    103134947 (rfc5)
   03036 Chromosome and associated proteins [BR:pfor03036]
    103134947 (rfc5)
   03400 DNA repair and recombination proteins [BR:pfor03400]
    103134947 (rfc5)
DNA replication proteins [BR:pfor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103134947 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103134947 (rfc5)
Chromosome and associated proteins [BR:pfor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103134947 (rfc5)
DNA repair and recombination proteins [BR:pfor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103134947 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103134947 (rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_11 AAA_22 AAA_24 AAA_assoc_2 RuvB_N AAA_14 ResIII AAA_16 DEAD DUF815 PhoH AAA_7 AAA_19 ATPase_2 AAA_5 TIP49 AAA_30 DNAX_ATPase_lid AAA_2 nSTAND3 Mg_chelatase Thioredoxin_6 AAA_25 DUF4119
Other DBs
NCBI-GeneID: 103134947
NCBI-ProteinID: XP_007547533
Ensembl: ENSPFOG00000014886
UniProt: A0A087YA93
LinkDB
Position
Unknown
AA seq 335 aa
MASTSKGQLQTRNLPWVEKYRPQTLDDLVSHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMKPRL
EHVIEKENIDITPDGMNAIVTLSKGDMRRSLNILQSTSMAYEKVTEHTVYTCTGHPLRSD
IANILDWCLNKDFTSAYKQVLELKTLKGLALHDILSEVHLLVHRVDFPPAIRMGLLIKLA
DIEYRLAAGTNEKIQLSSMVAAFQAVRNLVVSEAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcgtccacaagcaaagggcagttacagaccagaaacctaccatgggttgaaaaatac
agacctcagacactggatgatttagtttcacacaaagacattctgagcaccatccagaag
ttcatcagcgaggacaagcttccccacctgttgttctacggccctcctggaacaggaaag
acctccaccatcctcgcctgtgcaaggcagctgtacaaggacaaagagtttaactccatg
gtgttggagctaaatgcatcagacgacagagggattgacgtagtccgaggtcctattctg
agttttgccagcaccaggactattttcaaaaagggcttcaagttggtgatactggatgag
gccgatgccatgacccaggatgcccagaatgccttgcgacgagtcattgagaagttcaca
gaaaacactcgattctgcctgatctgcaactacctgtccaagatcatcccagccctgcag
tctcgctgcaccaggttccgcttcggcccgctgtctccggaccagatgaagcctcgactg
gagcacgttattgagaaggaaaacattgacatcactccagatggaatgaacgccatagtc
actctgtcgaaaggcgatatgagaagatcactcaacatcctgcagagcaccagcatggcg
tacgagaaggtcacagagcacacggtctacacctgcaccggccatcctctccgctctgac
atagccaatatcctcgactggtgcctcaacaaagacttcacttcagcttataaacaggtt
cttgagctgaagactttgaagggtttggctctgcatgatattctatctgaggtgcatctg
ctcgtccacagagtggactttcctccggccatacggatgggcctgcttatcaagttagcc
gacatagaataccggctggcggcaggaaccaatgaaaagatccagctgagctccatggtt
gcagccttccaggccgtcagaaacctggtggtcagtgaagcctcttaa

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