Poecilia formosa (Amazon molly): 103134947
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Entry
103134947 CDS
T07984
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03410
Base excision repair
pfor03420
Nucleotide excision repair
pfor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103134947 (rfc5)
03410 Base excision repair
103134947 (rfc5)
03420 Nucleotide excision repair
103134947 (rfc5)
03430 Mismatch repair
103134947 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfor03032
]
103134947 (rfc5)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103134947 (rfc5)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103134947 (rfc5)
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103134947 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
103134947 (rfc5)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103134947 (rfc5)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103134947 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
103134947 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_assoc_2
RuvB_N
AAA_14
ResIII
AAA_16
DEAD
DUF815
PhoH
AAA_7
AAA_19
ATPase_2
AAA_5
TIP49
AAA_30
DNAX_ATPase_lid
AAA_2
nSTAND3
Mg_chelatase
Thioredoxin_6
AAA_25
DUF4119
Motif
Other DBs
NCBI-GeneID:
103134947
NCBI-ProteinID:
XP_007547533
Ensembl:
ENSPFOG00000014886
UniProt:
A0A087YA93
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MASTSKGQLQTRNLPWVEKYRPQTLDDLVSHKDILSTIQKFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMKPRL
EHVIEKENIDITPDGMNAIVTLSKGDMRRSLNILQSTSMAYEKVTEHTVYTCTGHPLRSD
IANILDWCLNKDFTSAYKQVLELKTLKGLALHDILSEVHLLVHRVDFPPAIRMGLLIKLA
DIEYRLAAGTNEKIQLSSMVAAFQAVRNLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacaagcaaagggcagttacagaccagaaacctaccatgggttgaaaaatac
agacctcagacactggatgatttagtttcacacaaagacattctgagcaccatccagaag
ttcatcagcgaggacaagcttccccacctgttgttctacggccctcctggaacaggaaag
acctccaccatcctcgcctgtgcaaggcagctgtacaaggacaaagagtttaactccatg
gtgttggagctaaatgcatcagacgacagagggattgacgtagtccgaggtcctattctg
agttttgccagcaccaggactattttcaaaaagggcttcaagttggtgatactggatgag
gccgatgccatgacccaggatgcccagaatgccttgcgacgagtcattgagaagttcaca
gaaaacactcgattctgcctgatctgcaactacctgtccaagatcatcccagccctgcag
tctcgctgcaccaggttccgcttcggcccgctgtctccggaccagatgaagcctcgactg
gagcacgttattgagaaggaaaacattgacatcactccagatggaatgaacgccatagtc
actctgtcgaaaggcgatatgagaagatcactcaacatcctgcagagcaccagcatggcg
tacgagaaggtcacagagcacacggtctacacctgcaccggccatcctctccgctctgac
atagccaatatcctcgactggtgcctcaacaaagacttcacttcagcttataaacaggtt
cttgagctgaagactttgaagggtttggctctgcatgatattctatctgaggtgcatctg
ctcgtccacagagtggactttcctccggccatacggatgggcctgcttatcaagttagcc
gacatagaataccggctggcggcaggaaccaatgaaaagatccagctgagctccatggtt
gcagccttccaggccgtcagaaacctggtggtcagtgaagcctcttaa
DBGET
integrated database retrieval system