Poecilia formosa (Amazon molly): 103135019
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Entry
103135019 CDS
T07984
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103135019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103135019
03036 Chromosome and associated proteins [BR:
pfor03036
]
103135019
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103135019
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103135019
PBAF complex
103135019
GBAF(ncBAF) complex
103135019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
SpeFL
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
103135019
NCBI-ProteinID:
XP_007547624
Ensembl:
ENSPFOG00000002491
UniProt:
A0A087XA65
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MSGGTNLGFPGTNQALAHRKKDSSPSARFWESPDTLTQLEVVRQWIGKHYKKYVLVDAPS
CQVLAAVTLQLLQFQEDAFGRQAPNPALTKLPAHCFLDLQPGGGLCHILGTAYKFKVEQG
WRRFDLQNPSRTERNVEMFGVIEKALIQNNCVSIPVVFIDPTVDLELSSRLTGIIIKHKG
AITEDSIMATHHVYGPLASTEEDEWMRPVMRKDKHVLVHWGMHPDSYDSWLSSSDVEGDV
EDVPHVERPWRVHAGWVLDTDVFNEWMNEEDYCVNERNLPLILRQRIHLQEDQDSKSTPF
KKRRRSPSPSTDGRKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEVVTLPKNVNLKK
DSENTPVKGGIMADLDDQEDDFPGREEDEGRSEIPRLSEGEDNVTEQTHHIIIPSYTSWF
NYNSIHSIEKRALPEFFNGKNKSKTPEIFLAYRNFMIDTYRLNPQDYLSSTSCRRNLTGD
VCALIRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHKPLQVSA
SQHMLNFPEKSREKPSDYQNFGLRTDIYARKHPKTKGANAGREWTEQETLLLLEALEVYR
DDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENPVMSTV
AFLASVVDPRVASAAAKAALEEFSRAQEDSLYKTSDPSNQSEQMDAMEAERLDSSSLQVP
VRLDGVKMEPGVPKVDGDQVKREHSESILTEEGDVRGEDGENRGEGDDGRRGMELDLVEG
SVPTAAAAALSSAASKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE
KEALEQQRQQLLTERQTFHTEQLQQAEMKVRQQREQQGQPGYTMQHSGQSAANRMVPGGN
GQTMAPRHPGAPNGMYPSSQPDGTASAQPTPPSSSHS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggaacaaacctcggttttccggggacaaaccaagcgttggcgcatcgcaaa
aaagacagtagtccctctgctcggttctgggagagtccggacactttaacccagctggag
gtggtgcgacagtggatcgggaagcactacaaaaagtatgtgctggtggacgctccatct
tgtcaggtcctggctgcagtcaccttgcagcttctccagttccaggaggatgcctttggc
agacaagctcccaaccctgctcttacaaagcttccagcacattgtttcctggacttgcaa
ccaggcggcggactctgtcacatcctaggcaccgcttacaaattcaaggttgaacagggc
tggagaaggtttgacctgcagaatccgtcaagaactgagagaaacgtcgagatgtttggc
gtgattgaaaaggctttaatccagaacaactgtgtctccatccctgtggtatttattgac
cctactgttgacctggagctgtccagcagactcactggcatcatcatcaaacacaagggt
gcaattaccgaggacagtataatggccactcatcacgtatacggcccacttgcttccaca
gaggaggatgagtggatgcgtcctgttatgcgaaaggacaaacacgttttggtccactgg
ggcatgcaccctgacagttatgacagctggctgtcctcaagtgacgtggaaggagacgtc
gaagacgtgccgcacgtagagaggccatggagggttcatgcaggttgggttctggacaca
gacgtgtttaatgagtggatgaacgaggaggactattgtgtaaatgagaggaacctgccg
ctcatccttcgacagcgaatccacctacaagaagatcaggactccaagtccactccgttc
aaaaagagaagacgctcaccctctccttccactgatggcagaaaaaaagggaagaaaggg
agaaggcgcggccaacaggaagaggagccagaagaagacctgaccaaagacatggaggac
ccaacgcctgtgccaaacatggaagtagtcactctacccaagaatgtgaacctaaagaaa
gacagtgagaatacgccagtgaagggaggcatcatggctgacctcgatgatcaggaagat
gactttcctggaagggaagaagatgagggaagaagtgagatcccccgcttatcagaggga
gaggacaatgtcactgaacaaactcatcatatcataataccaagctacacgtcgtggttc
aattacaacagcattcactcgatagagaaacgtgctcttcctgaattcttcaacggaaag
aacaaatcaaaaactcctgaaatcttcttggcgtatcgtaacttcatgatcgacacgtac
cggctcaacccccaggactacctcagctcaacgtcctgcaggcgcaacctcactggagac
gtctgtgcccttataagggttcatgcttttttagaacagtggggtttgatcaactaccaa
gtggatgcagagagccgacccctccccatgggacctcctccaacccctcatttcaacgtc
ctggccgacacgccgtccgggctggcacccctgcagcacaaaccccttcaggtgtccgcc
tcacagcacatgttgaatttcccagagaagagcagagagaaaccttcagactaccagaac
tttggtctgcgcaccgacatctacgccaggaaacacccaaagactaaaggagcaaacgca
ggacgagaatggacagagcaggagacactgttactgttggaggccttagaagtgtacagg
gacgactggaacaaagtatcggagcacgtgggctccagaacgcaggacgaatgcatccta
cactttctacgtttgcccatcgaggacccctacctggaggactcgtcggcctctctgggg
ccgctggcgtatcagcccgtgccttttagccagtcggaaaaccccgtcatgagcaccgtg
gccttcctggcgtctgtggtagatccacgtgtggcgtcggctgcagcgaaggcggcgctg
gaggagttctccagagcacaggaagactcgctgtataaaacctctgatccatccaaccag
tcagaacaaatggatgcaatggaagcggaaagacttgattccagctcccttcaggttcct
gtgaggctggacggagtcaagatggagcctggcgtgccgaaagtggacggagatcaagtt
aaaagagaacatagtgaaagtattctgacggaggagggcgatgtcaggggggaggatggt
gagaacaggggagaaggggacgatgggaggagagggatggagctggacctggtggaggga
agcgttcccacggcggcggcagcagctctgtcatctgctgcctcaaaggccaagcactta
gcagcagtagaagagaggaagatcaagtctctggtggctctcctggtggagacgcagatg
aagaagctggagatcaaactgagacactttgaagagctggaaaccatcatggacagagag
aaagaggctctggagcagcagcgccaacagctgctgacagagaggcagactttccatact
gagcagctgcaacaggcagagatgaaggttcgccagcagagggagcagcagggccagccg
ggttacacaatgcaacattcaggccagtctgcggccaacaggatggtacctggaggaaac
ggtcagacgatggcccctcgacaccccggagccccaaatgggatgtacccgtcgtcacag
cctgatgggacagcatctgctcagcccactcctccgtcatccagtcacagctga
DBGET
integrated database retrieval system
