Poecilia formosa (Amazon molly): 103135533
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Entry
103135533 CDS
T07984
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103135533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103135533
Enzymes [BR:
pfor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103135533
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103135533
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103135533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
103135533
NCBI-ProteinID:
XP_007548382
Ensembl:
ENSPFOG00000006291
UniProt:
A0A087XKT7
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSSEEAANGKKSYWAELEISGRVRSLSTALWSLTHLTALHLSD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLAQEIMSLYQEPDGTRRLLSYLLDNLAGAIKRIPTEQPPARSWISLQEP
DRTRPATLFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILGCNADIISLQE
VETEQYFNFFLPELKEQGYDGFFSPKSRARTMSESDRKHVDGCAIFFKTEKFSAVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEVRKEMMEMSSGKSLHGLDKQLLLVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIVDKATRSFKLSTSGETNAIPLVLCADLNSLPDSG
VVEYLSSGGVDCTHKDFKELRYSDSLTKFNCNGKNSTSNGRITHGFKLKSAYDNGLMPYT
NYTFDFKGVIDYIFYSKPHLNVLGILGPLDPHWLVENNVSGCPHPHIPSDHFSLYAQLEL
LLPNVPSQVNGLHLPARR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaaatatgacccgccggatcccaggcggatgtacacaattatgtccagc
gaggaggcagcaaatgggaagaagtcatactgggctgagctggaaattagtggacgagta
aggagtctcagcacagccctgtggtctctcacccacctcactgccctgcacctcagtgac
aactctctgtcacgcatcccgccagacattgccaaactacacaacctggtgtacctggat
ctctcatccaacaagatcaggagcctgccggcagagctcggcaacatggtgtctctcagg
gaattgcttttaaataacaaccagttgcgagttctcccgtttgaattggggaaacttttt
cagttacagacactggggttaaaaggaaacccacttgcacaagaaattatgagcctctat
caggaacctgatggcacacggagactgctcagctacttgttagacaatctggcaggggct
attaagcgcataccaacagagcagccaccagccaggtcatggatctcgctccaggaacca
gaccgaacacgtccagcaacactgttctcagttatgtgttacaatgtgctgtgcgataag
tatgccacacgacagctatacggctactgcccctcctgggctctgaactgggagtacagg
aagaaatctatcatgcaggaaatcctcggctgcaacgcagacatcatcagtttgcaggaa
gtggaaacggagcagtacttcaatttcttcttaccagagttgaaagagcagggatacgac
gggttcttcagtccaaagtcacgagctagaacgatgtccgagtcggatcgtaaacatgtg
gacggatgtgcaatcttcttcaaaacagaaaaattcagcgctgtgcagaagcacacagtg
gagttcaaccagctggccatggctaactccgaaggctcagaggcgatgctgaacagggtg
atgaccaaggacaacatcggagtagctgtgctgcttgaagtccgcaaagagatgatggaa
atgtcttctggtaagtcactccacggcctggacaagcagctcctgctggtggcaaacgcc
cacatgcactgggatcccgagtactcggatgtcaagctggtccagaccatgatgttcctg
tcggaggtgaagaatatcgtggacaaggcaacacgcagcttcaagctgtccacctctggt
gagaccaatgccattccactggtgctgtgtgccgacctcaactccttacctgactctggt
gtagtcgagtacctgagttcaggcggagtggactgcacccacaaggacttcaaggagctt
cgctacagcgatagcctgaccaaattcaactgcaacggcaagaacagcacttctaatggc
aggatcacccacggcttcaagctcaagagtgcttatgacaacggcctaatgccttacacc
aattacaccttcgactttaagggtgtcatcgactatattttctactccaagcctcatctg
aacgtgttgggcatcttgggccccctggaccctcactggctcgtagagaacaatgtcagc
ggctgcccacacccccacatcccctctgaccacttctccctctatgctcagctggagttg
ctcttgcccaatgtgccctcccaggtcaacgggctgcacctgcccgcacgcaggtag
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