Poecilia formosa (Amazon molly): 103135882
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Entry
103135882 CDS
T07984
Symbol
tnpo1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103135882 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103135882 (tnpo1)
03009 Ribosome biogenesis [BR:
pfor03009
]
103135882 (tnpo1)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103135882 (tnpo1)
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103135882 (tnpo1)
Pre-60S particles
103135882 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
TOR1L1_N
IBN_N
Vac14_Fab1_bd
Cnd1
TPR_IPO5
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_Maestro
UNC45-central
Dopey_N
HEAT_DAAF5
VPS15-like_hel
TPR_TTI1_C
DUF3689
Motif
Other DBs
NCBI-GeneID:
103135882
NCBI-ProteinID:
XP_007548922
Ensembl:
ENSPFOG00000011447
UniProt:
A0A087Y0U7
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNVMIPKFL
QFFKHNSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIVEYMLLRTQDPDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
IPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEEDDDD
DDEMDDDDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPDWVVKESG
ILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDIY
LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKN
LLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATAL
QSGFLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEVPDKDFMIVALDLLSGLAEGLGG
TIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIGDFMPILGTNL
NPELISVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGR
LGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCD
AVASWVNPKDDLREMFYKILHGFKNQVGEDNWRRFSDQFPLPLKERLATFYGV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaggggcttcagcaaatactacagctgctgaag
gagtctcagtcaccagatacgtccacgcagagatccgtccagcaaagactcgagcagctg
aaccagtatccggactttaacaactatttgatatttgttttgaccaaattaaaatctgaa
gacgaaccgacccgttccctgagcggactgattctgaagaacaacgtcaaggctcactac
cagaacttcccaaacggagtgtctgatttcatcaagagcgaatgcctccaaaacatcgga
gactcctctcccctcattcgtgccacagtggggatcctcatcaccaccatcgcctccaaa
ggagagctgcaaaactggcctgagcttctgcccaaactctgtctgctgctggattctgaa
gactacaacacatgtgaaggagcgttcggggcgctgcagaagatctgtgaggactccgcc
gagatcctggacagcgacatgctggatcgtcctcttaacgtcatgatccccaaattcttg
cagttcttcaagcacaacagcccgaaaattaggtctcatgccatcgcctgtgtcaatcaa
ttcatcatcagcaggactcaggccctaatgcttcacatagacccgttcatcgagaacctg
tttgcactggcgaccgatgaggagcccgaagtgaggaagaatgtttgcagagccctcgtc
atgctgctggaggttcgcctggatcgtcttctgcctcacatgcacaacatcgtagagtac
atgctcctgaggacccaggacccagacgagaatgtcgccctggaggcctgtgagttctgg
cttacactggccgagcagccggtgtgtaaagaagtgctgtgcggtcacctctctcagctc
attcctgtacttgtcaacgggatgaagtactcggagatcgacatcatcttgctcaagggg
gacatcgaggaagacgaggccattccagacaacgagcaggacatcagaccgcgcttccac
cgctcccgcacggtcgcccagcagcatgagggcgacgggatcgaggaagatgacgacgac
gacgatgaaatggacgacgacgacgacgacgacacgatttctgattggaacctgcgaaag
tgctctgcagcagcgctggacgtgttggccaatgtgttcagggacgatctgctgctgcac
atcctcccactgctcaaagagctgcttttccaccctgactgggttgtaaaggagtctggc
atcctggtgctgggtgctatagctgaaggttgcatgcaaggcatgatcccctacctgcct
gagctcatcccgcacctcatccagtgcttgtctgacaaaaaggcactggtgcgatccatc
acctgctggacactgagtcgctacgcgcactgggtggtcagccagcccccagatatttac
ctgaagcctctaatgactgagctactgaagcgcatactggacagcaacaaacgtgtgcag
gaggccgcttgcagcgcctttgccacgttggaggaggaggcttgcacagagctggtgccc
tacctggcgttcatcttggacacgctggtgtttgctttcagcaagtaccagcacaaaaac
ctgctcattctctacgacgccattgggacgctcgcggattctgtgggacaccacctaaat
aaaccggaatacatccagatgttgatgccaccactgatacagaaatggaaccagctgaaa
gatgaagacaaagatctttttcctttgttggaatgtttatcctcggtagccacagccctt
caaagcggctttctgccctactgtgagcctgtttaccagcgatgcgtcaacctggtccag
aagacgctcgctcaggccatgcttcaccagtcacaacctgaccagtatgaggtaccggac
aaagacttcatgattgtggctctggacctactgagcggactggccgagggcctgggcggc
accatcgagcagctggtcgctcgtagcaacatcctcactctcatgtatcagtgcatgcag
gacaaaatgcctgaggtgcgtcagagctctttcgctctgcttggggatctcaccaaggct
tgcttccagcacgtcaaaccctgcatcggtgattttatgcccatactgggtacaaatttg
aacccagagttaatatctgtgtgcaacaatgcaacctgggcaatcggagagatttctata
caaatggggcctgaaatgcagccttacattgccatggtgctgcaccagctggtggagatc
attaacagacccaatactccaaagactctactggaaaacacagcaataacaattggtcgt
cttggttacgtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctgg
tgcacctccctgcgaaatataagagacaatgaggagaaagactcggcattcagaggaatt
tgcaccatgatcagtgtaaatcctggaggcgtggtgcaggactttatattcttctgcgac
gcagtggcctcctgggtaaatccaaaggacgatctcagagaaatgttctacaagatcctt
cacgggttcaagaaccaggtgggcgaagacaactggaggcgcttctctgatcagttcccg
cttcccttgaaggaacgactggcaaccttttatggggtgtaa
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