Poecilia formosa (Amazon molly): 103136055
Help
Entry
103136055 CDS
T07984
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103136055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfor03000
]
103136055
03021 Transcription machinery [BR:
pfor03021
]
103136055
03036 Chromosome and associated proteins [BR:
pfor03036
]
103136055
Transcription factors [BR:
pfor03000
]
Eukaryotic type
Helix-turn-helix
ARID
103136055
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103136055
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103136055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
103136055
NCBI-ProteinID:
XP_007549205
LinkDB
All DBs
Position
Unknown
AA seq
2219 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSGTLAPELNSGKSGGGGGGAGTAQRSGQMLGAGDGTLNNVD
HHRRGELGSMVHSTSATHKAPDGHDKTGINLSASNSNTSPMEAALIANHKLKCAGSGDAP
QPQQQQPPPPQFGQFAPHQQRQSNNSNNGQPSRGDRSVDHQQHGGKENLLVGQEESQQQH
GPGKGEGDLTCKATERMMGSRFEHSNLGPPTNNSEFNNSYYTSRPCYDQHGGQQQQSSGM
GVTQDSSEGGYHNNQYGQYPAYRAGYGGGAYGMIGSSGCRQPGNMMMGSNSSATHGKSPV
SGGFQRYPGQTQQQQGPSGATPTLNQLLTSPSPMMRGYGGAYQDYGGPTPQHQAGMALGK
DVGPQYGASTGHWGGQQRNHPLSMNAGSGGQGLGRTQVPSMDFMAMKRSQMYGMTNNPYS
TPQQPGAGSYPSSQPYASPPSHRYPMSMQGRSQMSMSGMQYPQQQQVAPYGQQSMGGFSR
EHQGGQQGTPPYFSPPQQTPTGPSQSSYLQPRPPPQQEAQQENYSMRGPAPGNSGKTSNE
DGVAQDRPSSLPDLSGSIDDLPTGTEAGLGSAVGAGGSSNGSSGGGSQGETGGAGNQGQS
PFSPHASPHLPGQRSGPSPSPVGSPAGSTQSQPSRSGSGPISPASGPPANTTAPGSAVAP
LSSGNGPDAAHLPITRSPMTQERGFMSMQRNQSGSQFAPPQSGPPMSPHPSHGGSMYPSM
GPYSQSGPAGPYGPQGPQYGHQGNYPRPSNYIGSAGSNYSGPGLSNSLGMNATSPMHGQG
PGGRSHGPGSQNRTYPIMGPTSPSMPQPAAPGMGPPSNRKPQEGVVANSVHNRQGNYQAP
GINQVSSGSYSQPTSNNSSTTGNGPGPGYGMPPAGAVGLSGDSIMSPESKQKTDVKDDSG
PNNEPHKPKLQDGYVNNNSSSVSQPATPGGTLPVPSPLSPSPASLSSYHGDDSDSISSPP
WPLKTPCSPKVNPNSSSIGGERISRLYELGSEPERRSWVERYLTFMEERGTPVSQLPVVG
KKPLDLWKLYVAVREIGGLAMVNKNKKWRELSGTLNVGTSSSSASTLKKQYIQYLFAYEC
KMERGEEPPTDSNSGGSLTEGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGSSSTAEAAG
DLKPPTPATTPLGQVTPLPPNRSSVSVQDPFSEVSDPAFQKRTSSLPPSAPYQQALGMPD
MMMRMQYDAKDPFVGMRKMAGADPYIPSHMSSGGMQDLYSRPPSGLSMSQRSQYPYGPGY
DRRPDHLMGMEGTMGPPGSQNNMGHSNSEGNMYSPSRYSSQQRHDGYSQQYPSMPYGMHP
SGMYPQQQGYKRQLDGMYGPPPKRHESDMYAMQYTNQQPDVYNHYSGGYSGPEHRPIQGQ
FPYTYHRDRMAPSGQSQLSMMGGGPASNHAPEGPNMWPSRTDLSYSYHSRQGPPSQMQPY
GSICRDDIDGRSAHDHWHRQPPYISSSGGMVPMSSRHSSYSNSPTMANHLPRAPSPGAFQ
RSMESRMSPSKAPFMSPMKMPKPGMAMMGSQGSGPNGQFPPNLRRDLNYPPGSVEATMPA
LKPRRKLTSKDCGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVASFNLSQLPGF
LELIVEYFRRCLIEIFGILEEFEVRTMAPKNNLDCDYTQKENATLEKEPDSANLSASELS
SATEMQERQTGVIKEEMSPVTEEQAEVPEKKQDPDMTKKKENSNKGQAEKGLKEVEEKET
RKGCLDEPPAETESKPRQASKYDKLPIKIVHKDDLIEDITERLGYVTEFDSGLLHWQAGG
GDSTAHIQTHFELRSDLPPRRGNKTLNENKPENKMEGEDSKTLKHVTATIDDVLCARVDA
LSHAHPARSLPSYPFRVHPDGEDDHITLLEDEPCCLDEAPLCTTSSWQDSLSKRCLCVSN
IVRSLSFIPGNDSEMSHHPALVLLLGRLLLLHHVHPERNRSAPTYQRDEQQERGLSSSKE
EWWWECLSLLRENAMVTLSNIAGHLDLSTYSDTICLPILDGLLHWMVCPSAEAQDPFPST
SPHSQLTPQRLVLECLCKLSIQDGNVDLLLATPPFSRQEKFFAVLVRYVGQRKAQVYREM
AVAVLSHLAQGDPTAARAIALQKASVGNLVTFLEDGVNMAQYQQNPHNLLHMGHPPMDPP
SVNMMCRAAKGLLAMAKVEENKKEFVLYESRLLDISISSVLNTGVVAIVCQVLFHLGKL
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataataaaaataagaaattatcc
ggcactttggctccggagctcaattcggggaaatccggaggaggaggtggaggggcaggg
accgcgcagcggagcggacagatgctgggtgccggcgatggaactctgaataatgtagac
catcaccgacgaggcgagctcggcagcatggtccattcaacttccgcgacgcacaaagct
ccggacggccacgacaagaccgggattaacctctcggcgtcaaactcaaacacttccccg
atggaagcggctctgatcgcgaaccacaagctgaaatgtgcggggagcggagatgcgcct
caacctcaacagcagcagccaccgccgccgcagttcggccagtttgcgccacatcagcag
cgacaaagtaacaacagcaacaacgggcagccctcccggggggacagaagtgtggaccac
cagcagcacggtggtaaggagaacctgttggtggggcaggaggagtcccagcagcagcac
ggcccggggaaaggtgagggggacctcacctgtaaagccacggagaggatgatgggctcc
aggtttgaacactccaacttgggtccccctactaacaactctgagtttaataacagctat
tacacttcaaggccgtgttatgatcagcatggcgggcagcaacaacaaagcagtggaatg
ggggtaactcaggactccagtgaaggggggtaccacaacaaccagtacggccagtacccg
gcataccgcgcgggctacggcggaggggcctacgggatgattggctcctctggatgcagg
cagccaggcaacatgatgatgggcagcaactcctctgcgacccacggcaagtcccctgtt
tcgggtgggtttcagaggtacccggggcaaacacagcagcaacaggggccctcaggggcc
acgccaaccctcaatcagctgctcacgtctcccagcccgatgatgcggggttacggaggt
gcttatcaggactacggcggcccgacgcctcagcatcaggcgggcatggctttggggaag
gacgtgggcccccaatatggagccagcactggccattggggagggcagcagaggaaccac
ccgctttcaatgaacgcaggcagcggagggcagggcctcggcagaacacaggttccctcc
atggatttcatggctatgaagcgctcacagatgtatggaatgaccaacaatccgtactcc
actcctcaacagccaggcgccggaagttacccctcaagccaaccatacgcatcacctcct
tcacatcgatatccaatgagcatgcaggggaggagccaaatgagcatgagtggcatgcaa
taccctcaacagcagcaggttgcaccatatggccagcagtcgatgggagggttcagcaga
gagcatcaaggagggcagcaaggaacccctccgtacttcagtcctcctcagcagactccc
acaggcccgtcccagagttcctacctgcagcctcgaccacctccgcagcaggaggctcag
caggaaaactacagcatgagaggacctgctccggggaattctgggaagaccagcaacgag
gacggagtcgcccaggaccgtccttccagtctgccggatctctctggctcgattgatgac
ctccccactgggacggaggccggcctgggctcggctgtcggcgctggcggatcctccaac
ggcagcagcggcggcggcagccaaggggagacgggaggcgccggtaaccagggacaatcc
cccttctccccccacgcctccccccacctccctggccagaggagtgggccctctccctct
ccggttgggtccccagcaggctccactcagtcccagccgtcccgttcaggctcaggacca
atttctcctgccagtggaccccctgccaacaccacagctccaggttcagctgtggccccg
ttgagctctggaaatggacccgatgcagcccatctcccaatcacacgctcccctatgact
caggagagaggttttatgtccatgcagagaaaccagtctggctcgcagttcgcacctccc
cagtccggacctcccatgtcgcctcacccatcccacggaggttcaatgtatcccagcatg
ggtccatattcacagagtggccctgcaggtccctatggacctcaaggaccccaatatgga
caccaaggtaactaccctcggccctctaactacattgggtcagctggaagcaactacagc
ggccccggcctgtccaacagtctggggatgaatgccactagccccatgcatggacaagga
cctggaggacggagccacggcccggggagccagaacaggacctacccaataatgggtccc
acttctcctagcatgccgcaaccagctgcaccagggatgggtcctccatctaatcgcaag
cctcaggagggagttgtagccaactcggtgcacaacaggcagggaaactaccaagcccct
ggtatcaaccaagtgagctctggctcctacagtcagccaacaagcaacaacagttcgacg
acaggcaacggaccaggtccaggctacggtatgccacctgcaggagcagtgggcctctca
ggagacagcataatgagcccagaaagtaaacagaaaacggatgtcaaagatgacagcggc
ccaaacaacgagccacacaaaccaaagctgcaggatggttacgtgaacaataacagcagc
agtgtttcccagccagccactccaggcggtaccctgcctgtgccctcccccctctctccc
agtcctgccagcctgtcttcctaccatggagacgacagcgacagcatcagtagcccaccg
tggcctctgaagaccccctgcagtcccaaagtcaaccccaactcgtcctccattggtggc
gagcggataagccggctgtatgaactcggttcagagccagagaggagatcttgggtggag
cgctacctgaccttcatggaggagcggggtacacctgtttctcagctcccagttgtgggc
aagaagccacttgatctctggaagctctatgttgctgttcgggaaataggaggcctcgcc
atggttaacaagaacaagaagtggcgcgagctctccggcactctgaatgttggtacgtcc
agcagctccgccagcacgctcaagaagcagtacatccagtatctgtttgcctacgagtgt
aagatggaaagaggagaggagccaccaacagacagcaacagcggcggcagcttgactgaa
ggggacagcaggaagcaggtcaagatccagccgccctcacctgccaactcaggtggctca
ctccaaggtccacaaacgccccagtcatccggcagcagttctacagcagaggcagcaggc
gacctgaaaccacccacacctgccaccaccccgctgggacaagtcactccactgcccccc
aacaggagcagtgtaagcgtacaggaccccttctcggaggtgagcgacccggcctttcag
aagcggacgagcagcctgcccccctcagctccataccagcaggccctcggcatgcctgac
atgatgatgaggatgcagtacgacgccaaggaccccttcgtggggatgaggaagatggca
ggagctgatccatatataccaagccatatgtccagtggtggtatgcaggacttgtacagt
cggcctccatcaggcctgagcatgagccagcggtcccagtatccctatggaccgggctat
gaccggagacctgaccatttgatggggatggagggaaccatgggtccgcctggaagtcag
aataacatgggacactctaatagtgaaggcaacatgtattctcccagcagatactcctca
cagcagagacatgacggttacagtcagcagtatcccagcatgccatatggcatgcatcca
tctgggatgtacccacagcaacagggctacaaacgacagttggatggaatgtatggtccc
ccacccaaaagacacgagagtgacatgtacgctatgcagtacaccaaccagcagccggat
gtgtacaatcactacagtggtgggtactcaggccctgaacacagacccatccaaggacag
ttcccttacacgtaccatcgtgaccgaatggccccatcgggccagagccagctcagtatg
atgggtgggggccctgcttctaaccatgctcctgagggacccaacatgtggccttcaaga
acagacctcagctattcctaccacagcagacaggggccaccatcgcaaatgcagccgtat
ggctctatttgcagagatgacattgacggtcgctctgcgcatgaccattggcaccgtcag
cctccctacatatcatcatcaggtggcatggtccccatgtcttcacgtcactcttcttat
tccaattctccaaccatggccaaccatctgcctcgagcgcccagcccaggggccttccag
cgctcaatggaatctcgaatgtcacccagtaaagcccctttcatgtctcccatgaagatg
cctaagccagggatggccatgatgggctcacaaggcagcggaccaaatggtcagtttcct
cctaacctgagaagggacctgaactaccctccagggtcagtcgaagccacaatgccagct
ctaaagccaagacgcaagctaacatcaaaggactgtggaacacctgaagcctggcgcgtg
atgatgtctctgaagtctggcctgctggcagaaagcacttgggcattagacaccattaac
atcctgctatatgatgacagcacagtggcctccttcaacctttcccagttgccaggattc
cttgagctaattgtggagtactttcgtcgctgcctgattgagatttttggaatcttggaa
gaatttgaggttcggacaatggctcccaaaaacaatctagattgtgattatacccagaaa
gaaaatgctacccttgaaaaggaacctgactctgcaaacctatcagcatccgaattatcc
tcagcaacagaaatgcaggagaggcaaacaggagttatcaaggaggaaatgtcacctgtc
accgaagagcaagctgaggtgccagaaaaaaagcaggatcctgatatgaccaagaaaaag
gaaaacagtaataaaggacaagcggaaaaaggactgaaagaagtggaagaaaaagaaact
agaaaaggttgtttggatgagcctcctgcagaaacagaatctaaacctagacaggccagt
aaatatgataaactccccattaagattgtgcacaaagacgacctgattgaagacataact
gagcgcttgggttatgtcactgagtttgacagtgggctgctacactggcaggcaggtgga
ggtgattccactgcacacattcagacgcactttgaactgcggagtgatctgccacccagg
aggggtaacaaaacattgaatgagaacaaaccggaaaataagatggaaggggaagatagc
aaaacactgaaacacgtcaccgccactattgatgacgttctgtgcgccagggttgacgcc
ctgtcgcacgcccatcctgctcgatctttgccatcttaccccttcagggtgcatccagac
ggggaggatgaccacattacccttctggaggacgagccctgctgcctggatgaggctccg
ctctgcacaacctcctcctggcaggactcactctccaagaggtgcctttgtgtttccaac
atcgtgcgaagtctgtcctttatccctgggaatgacagcgaaatgtctcaccatcctgcg
ctcgttcttcttttgggccgcctgcttttgttacaccatgttcacccagagagaaacagg
tcagcaccgacttaccagagggacgagcaacaggagcggggactgtcaagtagcaaagag
gagtggtggtgggagtgcctgagtttgctcagggagaatgccatggtcacgctttccaac
attgcaggacaccttgatctttcaacctattcagacaccatctgcctccccatccttgac
ggccttctacactggatggtttgtccctcagctgaagcgcaggacccctttccgtcaaca
tccccacactcccaactcactccccagaggctggtgctggagtgcctctgtaagctcagc
atccaagatggcaatgtggacctcctgctagccacgccacctttcagcagacaggaaaaa
ttctttgcagtcctggtgcgatacgttggtcagaggaaggcacaggtgtacagagaaatg
gcagttgctgttctctcacacctggcacagggagaccccaccgcagcacgtgccatcgcc
ttgcagaaggctagcgtgggtaacctggtaaccttcttggaggacggcgtcaatatggcg
caatatcaacagaacccgcacaatttgctgcacatgggacaccctccaatggaccctccc
agtgtaaacatgatgtgtcgagcagctaaaggactgttggccatggctaaagtggaggag
aacaagaaagagtttgtactgtatgaaagcagattattagacatctccatttcctcagtg
ctcaatacgggggtggttgccatcgtttgccaagttctctttcacttagggaaattatga
DBGET
integrated database retrieval system
