Poecilia formosa (Amazon molly): 103136436
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Entry
103136436 CDS
T07984
Name
(RefSeq) putative RNA exonuclease NEF-sp isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103136436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfor03009
]
103136436
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
Pre-60S particles
RNases
103136436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
103136436
NCBI-ProteinID:
XP_007549751
Ensembl:
ENSPFOG00000012767
UniProt:
A0A087Y445
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MECSSSSNVLSGKKKRQNEAPSAQEDVKRRKTEEEGDEDLRRRPCGSAKVSVRLDRLRQP
ITVAQLMELLHFAALGKSRGIKQPSWCRLHHQKKVSRINVAIVDGVTQSLFYNHYLSMEH
LRSSYATRISFTSSSDDVDDVASDIFSLEVPKVDFLCLSAAEEALHDALKYHPVITAFGT
QRRGLTAYLLSQQQMIKNHYPVKGLPGFEDFLCTGSDVRVTDDSPLYGLDCEMCQTMKGN
ELARVSLVDGDGNCLLDELVKPQNHVIDYLTRFSGITAAMLRPVTTTLRDVQAKIRTLLP
DDAVLVGHSLNNDLKALKLIHPHVIDTALLYRKEHGQKFKLKVLAQAVLKRQIQTEDQRG
HNPTEDAVAALDLAQYFIRTGPLQVVELHLEELWGWSLEESPDCTPEPTPSYRFADILQS
LSRPVAFLGKRAFVDLDLSHQRWYRSDKEMLSSFRNQTSHLFLSVLRFSSLSDHMKRSYA
HRYHQQQLHHNVSAVFRDMCTVFSGPFPVHFSKREVKRLFSCCGPVHKVQMRNTGVRIHA
KVEFQMLEGAMLALEVLNGFSVSGQTIKVQRPVKESMLDLDLNLDALMSDRVNTNQLYVS
RLSKDVAEGLSISATVNGRLLGGKPSGFHPGRQTNGSLQTAKVNGKHLHPGTIAPDLSEE
SLREAFSPFGSIKSVTLPGMHARHARIEFESSDGKHAALSSSDHLLKTGYLTWPSMTPPH
LHSWVGMATSRKMQDAEEDAADEQRPDSFTYGGIQRNQEASLLNKLDRRLSRVFNSLPDG
TLSVVLLLRHNSRGFDHPGLCFLEVKDGF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagtgctcctcatcttcaaacgtcctgagcggcaaaaagaaaagacaaaatgaagcc
ccgtctgctcaggaggacgtcaaaagaaggaagactgaggaggaaggcgacgaagacctc
cggcgacggccttgcggttcagcgaaggtgtcggtgcgcctggaccgcttgcggcagccg
atcaccgtggctcagctgatggagctgcttcattttgctgctctggggaaatccaggggt
atcaaacaaccgagttggtgtcgtctccaccatcagaagaaggtcagccgtataaatgtc
gcgatcgtggacggtgtgacgcagagtctcttctacaaccactacctttcgatggagcac
ctccggagcagctatgccaccagaatttccttcacttcatcatctgatgatgttgatgat
gtggcatctgacatcttcagccttgaagttcctaaggtggactttttatgtctttctgca
gcagaggaggcgcttcatgacgctctgaagtatcacccagttatcactgcgtttggcaca
cagaggaggggactgactgcatatctgcttagccaacaacagatgataaagaatcactat
ccagtcaagggacttccaggttttgaggactttctgtgcacaggcagcgatgtccgtgta
accgatgacagcccgctgtatggactagactgtgaaatgtgtcagacaatgaaaggaaac
gagttggctcgtgtttctctggtggacggtgatgggaactgcttactggatgagctggtg
aaacctcaaaaccatgtcatcgattacttaacgaggttctcaggcatcactgcagccatg
ttgagaccggtcaccaccacgctgcgggacgttcaggctaagatcaggacactgttacca
gatgatgccgttctggtgggccactccctcaacaatgacctcaaagcactcaaactcatc
catcctcacgtgatcgacaccgccctgctgtacaggaaagaacacggacagaagtttaag
ctgaaggttctggcccaggcggtgctgaagaggcagatccaaaccgaggaccagaggggt
cacaatcccaccgaggacgccgtggcagcgctggatctggcccagtacttcatcagaacg
gggccgctccaggttgtggagcttcacctggaggagctgtgggggtggagcttagaggag
tctcccgactgcacacctgaacccacgccaagttacaggtttgcagacattttgcagagc
ctcagccgccccgtagcatttctgggaaagcgcgccttcgttgacctggacctgtcccat
cagcgctggtacagatctgacaaagagatgctgtcatccttcaggaaccagacgagtcac
ttgttcctgtccgtccttcgcttttcgtccctctctgaccatatgaaaagaagctacgct
caccgttatcaccagcagcagctgcatcacaatgtttctgcagtcttccgggacatgtgc
accgtattttccgggccgttcccagtccacttttccaaaagagaagtgaagcggctgttt
agttgctgcgggccggtccacaaagtccagatgaggaacacaggagtcaggattcacgcc
aaggtggagtttcagatgctggaaggagcaatgctcgctttagaagttctgaatgggttc
agcgtgtcgggtcagaccatcaaggtgcagaggcctgtcaaagaatcaatgctggacttg
gacctgaatctggacgctctaatgagcgacagagtcaacaccaatcagctttatgtcagc
agactgagtaaggacgtggctgagggactgagcatttctgctacagttaacggccgtctg
ttgggtggaaaaccatcaggtttccatcccggcagacaaacgaacggatcattacagacg
gctaaagtcaacggtaaacatctgcatcccggcaccatcgcaccggacctgagcgaggag
agcctcagagaggcattcagtccctttgggtcaataaaaagtgtcacgctgcccggtatg
catgcaaggcatgcacgcattgagtttgagagttctgatggcaaacacgcggcactcagc
tcctcagatcatctgctgaaaaccgggtatctaacctggccgtctatgactccaccacac
ttacattcatgggttggcatggcgacatcaaggaagatgcaagacgcagaggaggatgcc
gcggacgagcagaggcctgactcatttacctacggtgggattcagaggaatcaggaagcg
agcctcctgaataagctggaccgccgactgagtagagtcttcaactcgctcccagacggc
accttgtctgtggtgctgctgctcagacacaacagtagaggttttgatcatcctggttta
tgttttttggaagtcaaagacggattttaa
DBGET
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