Poecilia formosa (Amazon molly): 103137920
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Entry
103137920 CDS
T07984
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03410
Base excision repair
pfor03420
Nucleotide excision repair
pfor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103137920 (rfc1)
03410 Base excision repair
103137920 (rfc1)
03420 Nucleotide excision repair
103137920 (rfc1)
03430 Mismatch repair
103137920 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfor03032
]
103137920 (rfc1)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103137920 (rfc1)
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103137920 (rfc1)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103137920 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
AAA_30
RuvB_N
AAA_17
Rad17
AAA_5
AAA_16
AAA_14
AAA_33
BRCT_2
nSTAND3
AAA_18
AAA_7
NTPase_1
RNA_helicase
AAA_19
Motif
Other DBs
NCBI-GeneID:
103137920
NCBI-ProteinID:
XP_007551992
Ensembl:
ENSPFOG00000010416
UniProt:
A0A087XXM7
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MDIRRFFGPVSGKPAPNVERKPDEKKKKKSSSEEDLKKRTKEGTKVKSSKNEEEHKSSEK
KRKKRQVIESDSDEEEPVMKAKKSSKEKAATSKAKPPPKKDPVQYVSETDSDSDNFQSLK
KASKSKQNGANKTSEEDSCSPKAKERVKSPAKPPLSRGKTERKSPKVPTTPKLAPPPQPK
QTPTSVLDYFGSGEINRSDKKLVASTKRKAPTQELDDLISDEELARQLQMEEDMEVEKQV
HEDEEFAKTLAMLDTEPQPKKARKNSEEKPSPTTTPKKSSVSVPSKTSRTPPEDVISPSP
KKSPAAVRASSKLALMKKRDEAKDEGAKSKAPASPRKNKTSPKKEPRASSISDMKFTPKA
GTTPTALKTSPTKPESTSTSPDDAEKKKMHTLAFRNYLNRDGPRALGSKEIPEGAENCLE
GCVFVLTGVLESMERDDAKALIERHGGKVTGNVSKKTNYLVQGRDSGASKLDKAESLGTT
ILDEDGLLELIRTKPGKKSKYEIAAEAESKASNTRTPPSRTSKVTPKAQKISPSKGNSRS
PKTPSPSKTGQAHRASGSSTPTGRGSGQTARRELGLASSSSSSSAPGPSPPSPQGDAAGL
LWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQNWHRHHSGGADKPAASRFGKFGGGKDDG
SGYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSIEN
FYRGTSQTVSSRHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHQKIRS
LANYCFDLRFQRPRVEQIKGAMMSLAYKEGIKIPPPALNEIILASNQDVRQVIHNLSMWS
AKDKVMTYDRCKSDAASARKDTKLGPFDVCRKVFASGEETAHMSLIDKSDLFFHDYSLAP
LFVQENYLHVRPAAARGDMKSHLVLLSKTADSIADGDLVDRRIRSSQNWSLLPTQAIFAS
VLPGELMRGYMSQFPVFPSWLGKNSSTNKHSRIVQELTSHMSLKTLSSRQAVNLDYMHYL
RHALLHPLQRHGTEGAAQAVQLLDDYQLLKEDVDSIMEISVWGGQPDPYSKLDPKVKAAF
TRAYNKEVHLTPYSLQTVKKGRRGGGADLDGGDEGPDDQESGDEAEGLKADAMIKQKKAK
TTKESTKEKKKESGKGKGKGKGKAKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggcggttctttggaccggtatcaggcaagcctgccccaaatgtagagcga
aaaccagacgagaagaagaaaaagaagagttcctcagaagaagatttgaaaaagaggacg
aaggaaggcactaaggtcaaaagctccaaaaatgaagaggaacacaaaagcagcgagaag
aaaagaaagaaacgccaagttatagaatcggattcggacgaggaagagccggtgatgaag
gctaagaaatcctccaaagagaaagctgcgaccagcaaagcaaagccgcctcctaagaag
gatcctgtgcagtacgtctctgaaacagactcggacagtgacaatttccagagtctgaag
aaggcctccaagtccaaacagaacggcgctaataaaacgtcagaagaagacagctgcagt
cctaaagccaaagagcgagtcaagtctcctgctaagcctcctttgagtcgggggaaaact
gagagaaagagtcccaaagttcctacaacccctaaactagcccctccccctcagcctaag
caaactcccacctctgtactcgactacttcggcagcggagagattaaccgctcagacaag
aagctggtggccagcaccaagcgaaaggctccgactcaagagttagacgacctgataagc
gacgaggaattggcccggcagctgcagatggaggaggacatggaggtggaaaaacaagtc
catgaggacgaggagtttgccaaaacattggccatgctggacaccgagccacagcccaaa
aaagcgcgcaaaaactctgaggaaaagccaagtccaaccacgacccccaagaagagcagc
gtgagcgtcccgtcgaagaccagtcggacccctccggaggacgtcatcagtccgtcgccc
aagaagagccccgctgccgtcagagccagctccaagctggccctgatgaagaaacgggac
gaggcgaaggacgaaggcgcgaaaagcaaagcacccgcttcaccgaggaaaaacaaaact
tctccgaagaaagagccgcgtgcttcttcgatttcggacatgaagttcacacccaaagca
ggaacgacaccgacagcgctgaagacgtctcccacgaagcccgagagcacaagtacaagt
cctgacgatgcagagaagaagaagatgcacacgctagctttcaggaattacctcaacaga
gacggaccgcgggcgctgggatccaaggaaatccccgagggagcagagaactgcttggag
gggtgtgtgtttgtgctgaccggagtcctggagtcgatggagagagacgacgccaaagct
ctcattgagcgtcacggaggcaaagtgacgggaaacgtcagcaagaagaccaactacctg
gtgcagggcagagacagcggagcgtccaaactggacaaggctgagagtttaggcaccacc
atcctggatgaggacggcttgttggagctgatcagaaccaaaccaggaaagaagtcaaag
tatgagatcgctgcagaagccgagagcaaagcctcaaacaccagaactcctccgagtcgg
acctcaaaggtcacccccaaggctcagaagatctccccctccaaggggaactccaggtcc
cccaagaccccgagcccctcaaagacgggccaggcacacagagccagcggcagcagcacc
ccaactgggaggggctctggacagacggcccggagggagctaggccttgcctcctcatcc
tcctcttcctcagctcctggaccctcccccccttccccgcagggggacgctgccggtctc
ctgtgggtggacaagtaccgtccgcgttccctgaaggctgtgatcggccagcagggggag
cagagctgcgccaacaagctgctccgctggctgcagaactggcacagacaccacagcgga
ggagcggacaaacccgcagcgtcgaggtttggtaaatttggaggagggaaagacgacgga
tcgggatacaaagccgctctgctctctgggcctccaggggtggggaagacgaccacagct
gccctggtctgtgaggagctgggcttcagctacgtggagatgaacgccagctgcactcgc
agcaaaaacagcctgaaggaagtcgtggcggagtcgctcaacaacaccagcatcgagaac
ttctacagaggaacgtctcagacggtgagcagtaggcacgtcctcatcatggacgaggtg
gacggcatggcgggaaatgaggaccgaggaggaatccaggaaatgatcggcctgatcaaa
aactccaagattcccatcatctgcatgtgcaacgaccgcaaccaccagaagatcaggtcg
ttggccaattactgcttcgacctgcgcttccagaggccgcgggtggagcagatcaaggga
gccatgatgtctcttgcttataaagagggaatcaagatccctcctccggctctcaatgaa
atcatcttggcctccaaccaggacgtgcgacaggtgattcacaacctgagcatgtggtcg
gccaaagacaaggtgatgacgtacgaccggtgcaagtccgacgcggccagcgcccgcaag
gacacgaagctggggccgttcgacgtctgcaggaaggtgttcgcctcgggcgaagagacg
gcccacatgagcctcatcgacaagtccgacctcttcttccacgactactctctggcgccg
ctcttcgtccaggagaactacctgcacgtccgtccggctgcggctcgcggagacatgaag
tcccacctggtgctgctcagtaagaccgccgactccatcgccgacggcgacctggtggac
agacggatccgatcgagtcagaactggtccctgcttcccactcaggccatctttgccagc
gtgttgccgggcgagctcatgagaggctacatgtctcagttccccgtcttccccagctgg
ctgggcaagaactcctctaccaacaaacattcccgcatcgtgcaggagctgacctcacac
atgagcttaaagaccctgagcagcagacaggcggtcaacctggactacatgcattacctg
cgccatgcgctgctgcatccgttgcagaggcacgggacagagggagcggcgcaggccgta
cagctgctggacgactaccagctcctcaaggaggacgtggacagcatcatggagatcagt
gtgtggggcgggcagcctgacccctactccaaactggaccccaaggtgaaggcagctttc
acgcgggcgtacaacaaggaggtccacctgacgccgtattccctccaaactgtaaagaag
ggtcgccgaggaggaggagcggatctggacggtggagacgaaggtccagacgaccaggag
tctggggacgaagccgagggcctcaaagcagacgccatgatcaaacagaagaaggccaaa
acaactaaagagtcgacgaaggagaagaagaaagagtccgggaaaggcaaaggcaagggg
aaaggcaaagcaaagaaatga
DBGET
integrated database retrieval system
