Poecilia formosa (Amazon molly): 103138054
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Entry
103138054 CDS
T07984
Name
(RefSeq) transcription initiation factor TFIID subunit 4B-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103138054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103138054
03036 Chromosome and associated proteins [BR:
pfor03036
]
103138054
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103138054
Coactivators
SAGA/TFTC/STAGA complex
103138054
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103138054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
103138054
NCBI-ProteinID:
XP_016527039
Ensembl:
ENSPFOG00000014662
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLTGQSNSAGKADENGGAGSVAPANHHLGK
TLPAPVSTTTLEQQQQPGRRNKPEMRQEVNSKDASPDKIVTSLSLSCSSSFGEPPSTSAG
CVNATSSGIQSHGASITPLTASGVSTLASPQDSISTTSSRSAKVSQCTGEAPAEASAPRK
RVATPRRSPSARIKSLNGAAVTTRRSSITAVTDSSIISSVDPGATPPNSTRSAINTSTFT
LSNANLPVGQSAIPLDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIEPATSS
SPTGDLSKAATDTGASKTDDCQSNIVTQSQVGSVSSVINTVLPSASCAITPATTTTAAPT
TTTTVTQPLSSATTAVCTTAMATTSVCGTVQTTAVTSTMSMVRPTAPSPTPAVATPALSQ
PRPGVPTPQRIVAPQLIVRPSQQQTTIQLPPGFTIPQGMVLVRTELGQLVLVPQQALAQA
QAQAQAQNNISPRPAAPTTGTSFRVTTPQQSPATSQTTRPCPLTPAKMAPSPSPAPSSPA
LQTSSSSTSSSSSCPALRPKGPVVPTVAVTAPQQAPMAITPQAQAQPTSQPAAQTQTSVA
AAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEF
TSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQGVKPAAGSTPPAMVAG
PAVRIRHPNSVSTTAGASVLPAGTVGHAAAMGVKTGGTVSGPVRMPMVITQSIRPQGTIG
KGAIIQAGKSPMGLPVQISGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILA
TNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHAAQSRLRTVL
EKVSIIAQHRIDSCKDDECYEQSADVRSQLRFFEQLERIEKQRKDEQEREILLKAAKVSY
RHLHPASCVCVTADMCMHVCACCSRVGSDR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgagaaggct
gttagcgacctggtgggctctttggagtctcaactgactgggcagagcaactccgcgggg
aaagcagacgaaaacggaggcgctggctctgtggcccctgctaaccatcacttaggaaaa
acgctcccagctccagtgagtaccacaacactagaacaacaacaacaacctggacggcgg
aataaacctgagatgcgccaggaggtgaactctaaggacgcaagcccggataaaattgtc
acctctctgtcgctgagctgctcctcttcttttggcgagcctcccagcacttcggctggc
tgtgtgaacgccactagcagcggcattcaatcacatggagcatccatcacaccgctgact
gcatctggcgtgtcaactttggcatccccgcaggacagcatcagcaccacatccagtcgg
agcgccaaggtgagccagtgcacaggtgaggcgcccgcggaggccagcgctccgaggaag
cgcgtcgcgacgccgagaaggagcccctcggcgcggataaagagtttgaacggcgcagcg
gtgacgacgagacggagcagcatcacagcggtgaccgacagcagcatcatcagctccgtg
gacccgggcgcaactccgccaaactccactcgatcggccatcaacacttccacgttcact
ctgtccaacgcaaacctccccgtgggtcagtcggctattcctctggaccgggggactccc
accattgccttgcacagactcccgagtcacatcgtagccagtattgcccagaacggcaac
gggaccagcgtttcggcgctggtccagcagggtgctcggatagagcccgccacatcctca
tctcccacgggagatctcagcaaggcggccacggacaccggagcttccaaaacagacgac
tgtcagtccaatattgtaacgcaaagccaggttggtagtgtgagctctgtaataaacact
gtactaccgtctgcttcctgcgctatcacaccagcaacaaccactacagcagctcctact
accaccaccacagtgacccagcctctgagctccgctacaacagctgtgtgtaccaccgcc
atggcgaccacatctgtctgtggaactgtccagaccacagctgtgacctccaccatgagc
atggtcaggcccacagctccctctccaacacctgccgtggccacccctgcactgtctcaa
ccccgtccaggggtcccaacgcctcagaggatagtagccccccagctgattgtcagacct
tcacaacagcagaccaccattcaacttccccctggctttaccatcccacagggaatggtg
ctggtgcgcactgaattgggccagttggtgttggttcctcagcaggctttggcccaagcc
caggctcaagcccaggcccagaacaacatctctccgagacctgctgctccaacgacggga
acgtccttcagagtaacaactccacagcagtctcctgcaacttctcagaccacaaggccg
tgccctttgaccccggccaagatggcaccgtctccctctcccgcaccttccagccctgcc
ctccagacctcttcctcctctacttcctcctcctcctcttgtcctgcactccgccctaag
ggccccgtggtgccgaccgtggcagtgacggctccgcagcaggcccccatggccatcacc
ccccaggcccaggcccagcctacctcccagccagcggcacagacgcagacgagcgtcgca
gcggcccccggagctccggtcgtgtcccaggagatgcaagaaaatgtgaagaagtgtaag
aatttcctggctacacttatcaagctggcgtctcacaactctccgtctcctgagacttcc
aagaacgtcaaagctctggttcaggatctgctggatgccaagatagaaccagaagagttc
accagcaggctgcagactgagctcaagtcgtctccgcagccttacctggtgccttttctc
aagaagagcctcccggccctgaggctgtctttgttgaacagtcagcagtccctgacccag
cccctgcagcagggagtcaaaccagcagccggcagcacccctcctgccatggtagctggg
ccagctgtccgcatacggcaccctaacagcgtcagcaccactgcgggtgccagcgtgctg
cccgctgggactgtcggacatgcagctgccatgggcgtgaagacaggagggactgtcagt
ggtccggtccggatgcccatggtgatcacgcagtccatcagaccgcaaggaacgataggg
aagggagccatcatacaagcaggcaaaagtcccatgggcctgcctgttcagatctctggg
aatcagaaaaacaagctcaacgaccccggaggaggctctttcagagacgatgatgacatc
aatgatgtggcctccatggccggggtgaatctgaatgaggagagcgccagaatacttgca
accaattctgagctggtgggaacgcagatccggtcgtgtaaagacgaggcctttctccat
ccgggtttgctacatcgacgaatcctggaaactgctaagaagtttggagtgacagaggtt
cccatggaagccgtgacattcatctcacacgctgcacagtctcgactccgaactgtgtta
gaaaaggtttctatcatcgcacagcatcgaatcgactcctgtaaggacgacgagtgctac
gagcagtctgcagacgttcggtcgcagctccgcttcttcgagcagctggagaggatcgag
aagcagaggaaggacgagcaggagagagagatccttctgaaagccgctaaagtaagttac
cgtcacctccatcccgcttcgtgcgtatgtgtgacagcggacatgtgcatgcatgtgtgt
gcatgttgctctcgtgtcggctctgacagatga
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