Poecilia formosa (Amazon molly): 103138523
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Entry
103138523 CDS
T07984
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03018
RNA degradation
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103138523 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
103138523 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103138523 (lsm7)
03041 Spliceosome [BR:
pfor03041
]
103138523 (lsm7)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103138523 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
103138523 (lsm7)
Spliceosome [BR:
pfor03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103138523 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
InhA-like_MAM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
103138523
NCBI-ProteinID:
XP_007552799
Ensembl:
ENSPFOG00000012467
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MKNGFSSDKEKKKKESIFDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYM
RDPDDQLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQHDG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgggttttccagtgacaaagaaaagaagaagaaggagagcatcttcgacttg
tctaaatacatcgacaagacaattcgtgtgaagttccaaggaggaagagaggccagcggc
gtcctgaaaggatttgatcctctgctaaacctggtgctggacggcacgatcgagtatatg
cgagatccagatgaccagctgaagctgacagaagacacccggcagctggggctggtggtc
tgcagaggaacctccgtagtgctgatctgccctcaggatggcatggaggccataccaaac
cccttcatacagcagcacgatggctaa
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integrated database retrieval system
