Poecilia formosa (Amazon molly): 103138685
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Entry
103138685 CDS
T07984
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103138685 (ddx1)
03016 Transfer RNA biogenesis [BR:
pfor03016
]
103138685 (ddx1)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103138685 (ddx1)
Spliceosome [BR:
pfor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103138685 (ddx1)
Transfer RNA biogenesis [BR:
pfor03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103138685 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
103138685
NCBI-ProteinID:
XP_007553058
Ensembl:
ENSPFOG00000011921
UniProt:
A0A087Y1Z8
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRAAVKTGGAIFNTWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCNDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGQISFSKNGNDLGSAFDIPENLSSQGFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDQAPESHTIKSSQTGSAKVTQVKASSNAPKALIIEPSKELAE
QTFNNVKQFKKNVENPKLRELLVIGGVAAKEQLAVLEQGVDIVVGTPGRLDDLVSTGKLS
LSQVRFLVLDECDGLLTAGYTDFINRIHKQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRQWERLGKNHVRTDEVHAKDNTRPGAN
TPEMWSEAIKKLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKNNLDRFKRKDVKLLICTDVAARGIDVSGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCQNRGRGCYNTRLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCDTDIKVPVDEFDGKVTYGQRRALGGGNYTGHVDVLAPTVQELAVLER
EAQTSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggtgttatgcctgaaatcgcgcaggctgtggaggagatg
gattggctactgccaacagatatccaagcagagtccattcccttgattcttggtggagga
gatgttctaatggcagcagaaactggtagtgggaagacaggagcctttagtatcccggtc
atccagattgtctacgaaaccctgaaggatcagcaggagggcaagaagggcagagctgct
gtcaaaactgggggagcaattttcaacacctggcagatgaatccatatgatcgtagccca
gccttcgcaatcggccccgacggactctgctgccagagcagggagttcaaagagtggcac
ggctgccgctccaccaaaggtgtcacaaaagggaagtactactatgaggtaacctgcaat
gaccagggtctctgccgggtgggttggtctaccagtcaagctgctctggatttgggaact
gacaagtacggctttggttttggtgggaccggaaagaaatccaacaacaagcaatttgac
agctacggggaggagtttaccatgcatgacactatcgggtgctacctggatttagacaag
gggcagatctccttctctaaaaatggaaacgacctgggttcagcttttgacatccctgaa
aatttaagtagccagggctttttcgcttcgtgcgtcctgaagaatgctgagctgaagttc
aactttggaggagaagacttcaaacatccccctaaaagtgggtttgtcgctctggatcag
gcaccggagagtcacaccattaaatcttcccaaacaggcagtgccaaagtgactcaagtg
aaggcttcatcaaacgcacccaaagccctgatcattgagccatccaaagagctggcagag
caaaccttcaacaatgtcaagcagtttaagaaaaatgtggaaaatcccaagctaagggag
cttcttgtgatcgggggtgttgcagctaaagagcagctagcagttctggaacagggggta
gacatagtggtgggaacacccggaagactggatgaccttgtttccaccggaaaactcagt
ctgtcccaagtccgtttcctggttctggatgagtgtgatggtctcctaacagccggatac
acagacttcatcaacagaatccataaacaaatccctcaggtcacctctgacggcaagaga
ctgcaggtcatcgtgtgctccgccacactgcattccttcgacgtgaagaagctctccgaa
cgcatcatgcattttcccacttgggtggacctaaaaggcgaggactctgtcccggaaacc
gtccaccacgtggtggtgccggtcaacccgaaggccgaccggcagtgggagcgcctcggc
aagaaccacgtccggaccgatgaagtccacgccaaagataacacccgaccaggagccaat
acgccagaaatgtggtctgaagctatcaagaagctgaagggcgagtacacggtcagggcc
atcaaagagcacaaaatggaccaggctataatcttctgtcgcaccaagatcgactgcgac
aacatggagcaatacttcattcagcaaggaggaggtccagacagcaaaggtcaccagttc
tcctgcgtttgccttcatggtgatcgaaagccgaacgagaggaagaataacttggatcgc
ttcaagagaaaagatgtgaagctgctgatctgcacagacgtggccgccagaggaatcgac
gtcagcggcgttccttatgtgattaatgtcaccctgcctgacgagaagcagaactatgtc
catcgtatcggcagagttggtagagcagagagaatgggacttgccatctccctagttgct
atggaaaaagaaaaggtgtggtaccacgtttgtcagaaccgagggagaggctgctacaac
acccgactgaaggaggacggagggtgcaccatatggtacaacgagaaagagcttctgtct
gaaatcgaggagcatctgaaatgcaccatcactcagtgtgacacggatattaaagtgcct
gtagatgagtttgacggaaaagtgacttatggacagcgcagagctcttggaggcggaaac
tatacgggtcacgtggacgttctggccccgacagtccaggagttggccgtccttgagaga
gaagctcaaacatcttttcttcatttaggatacatgccaaaccagctgttcagggccttc
taa
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