Poecilia formosa (Amazon molly): 103139620
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Entry
103139620 CDS
T07984
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03420
Nucleotide excision repair
pfor03430
Mismatch repair
pfor03440
Homologous recombination
pfor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103139620 (rpa1)
03420 Nucleotide excision repair
103139620 (rpa1)
03430 Mismatch repair
103139620 (rpa1)
03440 Homologous recombination
103139620 (rpa1)
03460 Fanconi anemia pathway
103139620 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfor03000
]
103139620 (rpa1)
03032 DNA replication proteins [BR:
pfor03032
]
103139620 (rpa1)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103139620 (rpa1)
Transcription factors [BR:
pfor03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103139620 (rpa1)
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103139620 (rpa1)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103139620 (rpa1)
MMR (mismatch excision repair)
103139620 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103139620 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Pox_vIL-18BP
CDC24_OB3
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
103139620
NCBI-ProteinID:
XP_007554406
Ensembl:
ENSPFOG00000003987
UniProt:
A0A087XEF5
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MASLSTGAIEALANGSGWNEAVLQLVNIRKIDGGSGPSRFRVMMSDGRHTLSSFMLSTQL
NYMAEENLLVPNCVCVLKRQVTNMLKDGRRVVIILEIDVIKPADASGKIGDPVPYSDGQS
RGPQPAPVPESRPPLQPQNRNEAVVRNLKRDFAKKIPSALPDTPGGSSKIVPIASLNPYQ
SKWTIRARVTNKSSIRTWSNARGEGKLFSMEIVDESGEIRVTGFNQEVDKFFSLIEVGKV
YYISKGSLKIANKQYTSVKNDYEMTLNGESTVIPCEDSCDVPMVQCDFVPIGDLENREKD
AIVDVIGVCKSVDELTRLTTKSNREVSKRTLSLMDISGKLVTVTLWGEEAEKFDGSGQPI
VAIKSAKLSDFGGRSLSASFSSTMMINPDIPEAYKLRGWFDKEGHAMEGQSLTEVRGAGG
RLSENWKSLADVKSEHLGHGDKADYYSCIATIVFLRKENCLYQACPTQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADYADNQWVTCFQDSAEAILGQNAAYLGQLKDSNES
AFDEIFQQANFNTFIFRNRVKLETYNDESRIKATVMDVKPVDHREYSKRLIMNIRSMGAK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtctttcaacgggcgcgatagaggctttagcaaatggcagcggttggaacgaa
gcagtgctacagttggtgaacattcgcaagatcgatggcgggagtgggccctctcgcttc
agggtgatgatgagcgatggacgacacacactgtcatccttcatgctctccactcagcta
aactacatggccgaggaaaaccttctggtcccaaactgcgtgtgcgtcctgaagaggcag
gtcaccaatatgctcaaagatggacgacgagtggtaatcattttagaaatcgacgtcatc
aaacctgctgacgcctctggtaaaataggagacccagttccttactctgacggtcagagc
agaggcccgcaaccagctccagtccctgaaagcagaccgcctctgcagccacaaaacaga
aatgaagctgtggtcagaaatttgaagagagactttgcaaagaagattccttctgctttg
cctgatactccaggaggaagctccaaaattgtccccatcgccagcctcaacccctaccag
tccaagtggacgatccgggctcgtgtgaccaataagagctccattcgtacgtggagcaat
gctcgaggcgaaggaaaactcttctctatggagatcgtagatgaaagtggggagatccgt
gttaccggcttcaaccaagaagtcgacaagttcttctctctcatcgaggtcggcaaggtc
tactacatctccaagggctctctgaagatcgcaaacaagcagtacacgtcggtgaagaac
gactacgaaatgactctcaacggagagtccaccgtcattccctgtgaggacagctgcgac
gttcccatggtgcagtgcgactttgtccccatcggcgacttggagaacagagagaaagac
gctatcgttgatgtgattggagtgtgcaagagcgtagatgagctgacccgcctgacgacc
aagtccaaccgcgaagtgtccaagaggacgctgagtctgatggacatatccggaaagttg
gtgaccgtcaccctgtggggagaggaagcggagaagtttgacggctccggacagccgatc
gtagccataaagagcgccaagctctcggactttggaggccgctcgctttccgcgtccttc
agcagcaccatgatgatcaacccagacatcccagaggcgtacaagctcagaggctggttt
gacaaggaaggacacgccatggaaggacagtccctgacggaggtgaggggtgccggcgga
aggctctctgagaactggaagtccttggctgacgtgaagtcggagcatctgggacacggt
gacaaggccgactactactcctgcatagccaccatcgtgtttctgcgtaaggagaactgc
ctttaccaggcctgcccgacccaggactgcaacaaaaaggtggtggaccagcagaatggc
atgttccgctgcgagaagtgtgataaagagtttcccaacttcaagtaccgcctcattctg
tccgccaacattgcagactacgccgacaaccagtgggtgacttgcttccaggacagcgct
gaggccatcctgggccagaacgccgcgtacttgggccagctcaaggactcaaatgaatcg
gcattcgacgagatcttccagcaagcgaacttcaacacttttatctttcgcaacagagtg
aagctggaaacatacaacgacgagtcaaggattaaagcgacggtgatggacgtgaagcca
gtcgaccacagagagtacagcaagaggctgatcatgaacatacggagtatgggagccaag
tag
DBGET
integrated database retrieval system
