Poecilia formosa (Amazon molly): 103139643
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Entry
103139643 CDS
T07984
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X3
KO
K07466
replication factor A1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03420
Nucleotide excision repair
pfor03430
Mismatch repair
pfor03440
Homologous recombination
pfor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103139643
03420 Nucleotide excision repair
103139643
03430 Mismatch repair
103139643
03440 Homologous recombination
103139643
03460 Fanconi anemia pathway
103139643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfor03000
]
103139643
03032 DNA replication proteins [BR:
pfor03032
]
103139643
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103139643
Transcription factors [BR:
pfor03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103139643
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103139643
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103139643
MMR (mismatch excision repair)
103139643
DSBR (double strand breaks repair)
HR (homologous recombination)
103139643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Extensin_1
CATSPERD-E_C
DUF7766
Motif
Other DBs
NCBI-GeneID:
103139643
NCBI-ProteinID:
XP_007554453
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MTAKLTQGAVEALVKGSHVENPVLQLLNIRQINTTGVPRYRLMMSDGQHYLSSFLMATQL
NHLAEENLLVPHCVCLLKRMTNNTLSDGRHVVVVVDMDVLKSAEEAGGKIGNPTSYSTDG
KLSSPNKVSSTTSEPSSTSAAELPGPSNNSKGRGKGFTGKAPVKASPMMTSPMKGSPTKA
SPMMTSPMKGSPMKASTMMTSPTKGSPMKASTSSPGSVPKVMPIATLNPYNNKWTIRARV
TNKSNIRNWSNSRGEGKLFSFEVVDESGEIRITAFNNEVDKFFALLEQGKVYYISKATLK
VANKQYTTLKNDYEMTLHAHSSIVPCTDGQDVPVMQCDFVPIGELENRDKDSIVDIIGVC
NSAEDVSRITTKTSREVSKRAISLIDTTGKVVTVTLWGEEAEKFDDSGQPVVAIKGARLS
DFRGISLTALFSSTIMVNPDLPEAFRLRAWYDREGYAVDSQSLTETVSVGVGSKMNWKTL
SDVKNENMGHGEKADYFSCVATIVYMRKENCLYQACPSSDCNKKVIDQQNGFYRCEKCNR
EFPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLGRKAEELGQLRETDEEGFDEVFQKA
NFSTHIFKNRVKLETYNDESRVKVTVMEVLPVDHRVYSRRLLSNIRKLAH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaaactaacacagggggcagttgaagccctggtcaaaggatcccatgtagag
aatccggtgctgcagttactgaacattcgtcagattaataccacaggtgtgcccaggtac
cgcctcatgatgagtgatggtcagcactacttgtcttccttcctgatggccacccagttg
aaccatctggcagaagagaacctccttgtaccacattgtgtgtgtttgttaaaaaggatg
accaataacactttgtcagatggccggcacgtggtcgtcgtcgtggacatggacgtcttg
aagtcagcagaagaagctggaggaaagattggaaatcccacctcatattcaacagatggc
aagttgtcatctccaaataaggtgtcatcaaccacctcggaaccatcgtccacttcagcc
gctgagctacctggaccatccaacaacagcaaaggacggggaaaaggtttcactggaaaa
gctcctgtgaaggcttcaccaatgatgacctctcccatgaaagggtcacccacgaaggct
tcaccaatgatgacctctcccatgaaagggtcacccatgaaggcttcaacaatgatgacc
tctcccacgaaagggtcacctatgaaggcgtccaccagttcaccaggttctgtcccaaaa
gtgatgcctatcgctaccctcaacccgtacaacaacaagtggactatcagagccagagtc
acaaacaaatccaatatccgcaactggagtaactccagaggggagggcaagctcttctcc
tttgaggtcgtggatgagagtggtgaaatcaggatcacagccttcaacaatgaagtggac
aagttttttgctctgttggagcaaggcaaggtgtactacatctcgaaggcgactctgaag
gtagccaacaaacagtatacgacactgaagaacgactacgagatgaccctccacgctcat
tcatctatcgtaccctgtacggacggtcaggatgtcccagtaatgcagtgcgactttgtg
cccattggagagctggaaaaccgagacaaagactccatcgttgatataattggagtgtgc
aacagtgcagaggatgtatcccgtatcaccactaagaccagcagggaagtctccaagagg
gccatcagcctaatagacaccactggcaaagtggtgacagtcacactgtggggagaagag
gcggaaaagtttgacgactccggacagcctgttgttgctatcaaaggagctcgcttgtct
gattttcgaggcatatctctcacagctttgttcagttctacaatcatggtgaacccagat
ttacccgaagccttcagactcagggcctggtatgaccgggaaggttatgcagttgacagc
cagtcgctaacagaaaccgtgtcagtcggtgttggatcgaagatgaactggaaaacgctg
agcgatgttaagaatgaaaacatgggacacggagaaaaggcagactattttagctgcgtg
gcaactatagtttacatgcgtaaagaaaattgtttgtatcaagcctgtccgtcttcagac
tgcaacaagaaggtcatagatcaacagaatggtttttatcgctgcgagaagtgtaacaga
gagttccccaacttcaaatatagactcctactttcagctaacttggcagacttcggggat
aaccagtgggtgacatgcttccaggagacagctgaggtcctgctgggtcgcaaggcagaa
gagctgggacagctcagagaaacagacgaggaagggtttgatgaagtcttccagaaagcc
aacttctctacccacatctttaagaaccgagtcaagctggagacgtataatgacgagagt
cgggtgaaagtgaccgtaatggaagtacttcctgtcgaccacagagtgtacagcagacga
cttctcagtaacattcggaaattggctcactga
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integrated database retrieval system
