Poecilia formosa (Amazon molly): 103140289
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Entry
103140289 CDS
T07984
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X2
KO
K06237
collagen type IV alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04382
Cornified envelope formation
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04518
Integrin signaling
pfor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103140289 (col4a2)
04518 Integrin signaling
103140289 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103140289 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103140289 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103140289 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfor04147
]
103140289 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103140289 (col4a2)
Exosome [BR:
pfor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103140289 (col4a2)
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103140289 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103140289
NCBI-ProteinID:
XP_007555426
Ensembl:
ENSPFOG00000012714
UniProt:
A0A087Y5U9
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MSATMQRQQDREHTNLRVLRLCLFLAALAWTVQAGGKKHSGPCGGRDCSGGCQCFPEKGA
RGLPGPLGPQGSQGPPGRPGDPGIQGHKGQKGDQGTGGFIGPKGSTGMTGVPGFSGSDGI
PGHPGQAGSRGKPGADGCNGTKGEPGFPGLPGFLGGPGNPGLKGRKGAKGDSLDVTIYIE
RFRGDPGRPGEDGFPGPPGPQGREGSRGPIGPKGPPGPPGPRGPKGTMTKVLKGVKGEMG
DIGPQGPPGNYTTQQRQPITGPSGLPGDKGERGDLADNLDGKGETGIMGMPGPRGESGAD
GPPGRKGEPGYPGLNGRDGPKGGRGDPGELISSGFPWSVGGLPGPRGETGPDGERGPIGD
KGLPGPPGLPASDTQQQSWDFFGLSGEKGAQGDKGLPGDQGRPAVFPGPKGSDGSPGSRG
PPGPRGSWKEFFKGEQGPRGRPGNAGAKGFKGELGECQCSSENFLRGLPGPAGKRGDPGM
TGEFGYEGDMGDQGPRGADGFPGSAGLDGFPGPKGRKGETTVAREKGSPGEPGDPGIDGV
VGLHGSPGPNGLHGLPGNRGPPGEGPRGERGDKGFPGWPGRPGSRGEAGTPGESVVGIKG
QHGPPGDDGLTGYDGVQGTPGSPGGCIPDGAGGQVDVTGDCEPIPGPPGQPGPPGISGIS
GSPGVPGPKGFSGVEGVNGEKGEQGERGRGGTPGPRGFPGPRGDLGTPGTKGSLGNPGVP
GMPGRYGSQGEKGAHGEVMGASPGPPGDPGLPGLRGQKGQLGDQGQPGISGIDGMPGMIG
FRGLKGAPGLPGEEGRPGPAGTYGFPGDPGRSGPPGPAGTTGEPGRTGERGTGGDPGPPG
PIGLKGMPGAYGDDGGIGERGPPGDPGEPGATGRPGLQGLKGTKGSHGTYGFEGVTGNPG
LKGYEGLKGGPGTPGEVGLKGLAGSKGERGEQGLQGKPGVMSPKMLIHIKGAKGEHGHQG
SPGFTGPRGTKGDQGVPGYDGAHGLPGDPSDEKGVHGDPGAQGLPGIKGMPGTPGSRGIQ
GFDGMHGDKGGKGSPGAFGHTGVQGKKGGKGDKGIRVDLPGSPGLRGEDGFAGEPGLKGL
PGPIGDRGITGFDGIKGVKGEAGDLGIEGFPGLDGQRGTPGNQGQKGFPGIPGKDGIPGV
PGFSGNKGYPGLPGLYGLHGLKGQKGVSGTPGLDIVGPAGETGVKGRKGESGIPNSQPGS
PGPSGLKGFQGNLGDYGQPGLPGLRGLQGPSGTPDIAGKRGDPGFPGPRGSQGYPGASGP
PGLDAFPGEKGVPGENGFPGPTGTRGSRGDSGPAGYRGPDGISGKKGPKGDQGHMGIPGQ
TGLQGERGPVGPKGDTGLPGFPGARGSQGGLPPSIIIPGERGLPGPRGIPGPKGISGGPG
PRGPPGDPGFMGPVGLKGMPGIGGTPGVPGYRGEVGNVGHPGLQGMEGQRGRPGGPGLPG
MAGRSISVGYLLVKHSQSDQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGLAGSCLPR
FSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEKEIQPYISRCSVCEAPSVAI
AVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIECNG
AKGTCHYFANKHSFWLTSIDQSFHTQPSSETLKAGQLLSRISRCQVCMKNL
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccatgcaaaggcagcaggatagagagcatacaaatctgagggtgctgcgt
ctctgcctcttcctcgccgccctcgcctggacagtgcaggctggtgggaagaagcacagt
ggcccgtgtgggggaagagactgcagcggtggttgtcaatgctttccagagaagggtgcc
aggggtcttccagggcctcttggtcctcagggctcacaggggcccccagggcgaccaggg
gatcctggtattcaaggacacaagggacagaaaggtgaccaaggaactggtggcttcata
ggcccaaaaggcagcacgggaatgactggtgtacctgggttctctggaagcgacggcatc
cctggccacccaggacaagctgggtccagagggaagccaggagcagacggctgtaacggg
accaaaggagaacctggattcccaggattacctggttttctcgggggccctggaaatccc
ggtctaaaaggcaggaagggagcgaaaggggactctctggatgtcaccatttacatagag
cgctttaggggagatccagggagaccaggagaggacggatttccggggcctccaggacca
caagggcgggaaggtagcagaggccctataggacccaagggtcctccaggtcctccaggg
ccacgtggaccaaagggcaccatgaccaaagtgttgaagggagtcaaaggagaaatgggg
gacatcggaccacagggcccaccaggaaactacaccactcagcaacgtcagcctatcact
ggaccttctggattaccaggtgacaaaggagaaagaggagatctggcagacaacttagac
ggcaaaggagaaactggtataatgggaatgcctggccctcggggcgaaagtggtgcggat
ggacctccgggtcgaaagggcgagcccggttatccagggctgaacggcagagacggacct
aagggaggcagaggtgatccaggggagctgatttcatcaggatttccctggtctgtgggt
ggccttcctgggccccgtggtgagacgggtccagatggagagaggggtccgatcggagac
aaaggcttgcccggaccacctggacttcctgcctctgacacacagcaacaatcttgggat
ttcttcggcctttctggtgaaaagggggcacaaggagacaagggtctaccaggagaccaa
ggaagacctgccgtctttccgggacccaaaggatctgatggaagtccggggagcagaggt
ccaccgggacccagaggatcgtggaaagagttctttaaaggagagcaagggccgagggga
agacctggcaatgcaggggctaaaggatttaaaggggaacttggagaatgtcagtgcagt
agtgaaaatttcctccgcggcttacctggtcctgccggtaagcgcggagatcctgggatg
accggagagttcggatacgaaggggacatgggagaccagggtccccgaggcgccgacggg
tttcctggatctgctggcctcgatggttttccagggcccaaaggacgaaaaggagaaaca
actgttgcgagagaaaaaggatcccctggagagcctggagacccgggaattgatggagtg
gtaggattacacggttcgccaggcccaaatggtctccatggtctccctggtaaccgcggt
cctccaggcgaaggacccaggggagagcgtggagacaaagggttccccggatggcccggt
agacccggttctcgtggggaggcgggaacgccaggtgaaagcgttgtaggtatcaaagga
cagcatggcccacccggtgatgacggcctcacaggctatgatggagttcagggaacgcct
ggaagtccgggcggctgcataccagatggagctggaggacaggtggatgtgacaggtgat
tgtgaacctatcccaggtcctcctggtcagcctggacctcctggaatcagtggaatatca
ggttctccaggagttcctggcccaaaaggtttctctggtgtggaaggagtcaatggagag
aaaggagaacaaggagagcgtggcagaggcggcactcctggaccacgaggttttcctggt
ccccgtggagacttggggactcctggcactaaaggctctttagggaatcccggtgttccg
ggcatgcctggccgatacggatctcaaggggaaaaaggtgctcacggagaagtaatggga
gcatcgcctggccctccaggcgacccaggactacctggcctgcgagggcaaaagggccaa
cttggagatcaagggcagccagggatttcaggaatcgacgggatgcctgggatgatcggc
ttcaggggactgaaaggcgccccaggcctgccaggggaagagggaagacccgggccagct
gggacgtacggtttccccggggatcctggcaggtcgggcccacctggtccggcagggaca
actggagagccaggaagaactggagagagaggaacaggaggtgacccaggtcctccaggt
ccaataggattaaaaggaatgccaggtgcttatggagatgatggtgggatcggagagcgc
ggcccgccaggtgaccctggagaaccaggtgcaaccggacgaccaggccttcaaggactc
aaaggaacaaaaggtagtcatggaacgtatggttttgagggagtcacaggaaatcctggt
ctgaagggttatgagggactaaaaggggggcctggaacacctggagaagttggcctgaaa
ggactggcagggtcaaagggagagagaggcgaacaaggtctgcaaggtaaaccgggggta
atgtcgccgaaaatgcttatccacataaagggggccaaaggagagcacggacaccagggc
agtccaggttttaccggaccaagaggtaccaaaggtgaccaaggtgtgccgggctacgat
ggagctcacggtcttccaggggaccccagcgatgaaaaaggagttcatggggatccaggt
gcacagggcctgccaggcattaagggaatgccagggacacctggaagcagaggcatccaa
ggctttgacggaatgcatggtgacaaggggggcaaaggaagccctggtgccttcggtcat
acaggagtgcaaggaaagaaaggaggaaaaggtgacaagggcattcgagtggaccttcca
ggatctccaggattgagaggagaggatggatttgcaggagaaccaggtctgaaaggtcta
cctggaccaatcggggaccgtggcataaccggatttgacggtattaaaggggtaaaggga
gaagccggggatctgggaatagaaggattcccagggttggatgggcagagaggaactccg
gggaaccaaggtcaaaagggttttcctggaattcccgggaaagatgggataccaggtgtt
cctggcttctccggaaataaaggttaccccggcctaccgggtctttatggattacatgga
ctgaaaggacagaagggtgtctcaggaacaccaggtctggacattgttggacctgctgga
gaaactggagttaaaggaaggaaaggagaaagcggtattcccaacagccagccaggttct
ccaggtccatcaggactgaaaggcttccagggaaatctgggtgactatggccaacctgga
ctgccaggattacgtggccttcagggaccaagtgggaccccagacatagcgggaaagagg
ggggatcctggcttcccaggacctcgaggatcccaaggttatcccggagcaagcggaccg
cctggactggatgctttcccaggagagaaaggcgtaccaggcgaaaatgggttccccggc
cccactggtacgagaggatctcgaggagattcaggtccagcaggctacaggggccctgat
ggaatctctgggaagaaaggaccaaagggagaccaaggtcacatgggaattcctggacag
actggcttacagggagaaagaggaccagtgggcccgaaaggagacactggattgccaggt
tttcctggagcgcgtggcagccagggcggtcttccaccttccattataatcccaggagaa
agaggccttccaggaccgcggggtatcccaggcccgaaagggatttcaggggggccagga
cctcgaggcccacctggagacccagggttcatgggacctgttggacttaaaggcatgcct
gggattggtggtactccaggagtgccaggttaccgcggcgaggtgggcaatgtggggcac
cctggtcttcaaggcatggaaggacaaagaggcaggcccggcggcccaggattacctggc
atggcgggccgcagtatcagcgtgggctacctgctggtgaaacacagtcagtcagaccag
acgccaatgtgtccggtgggaatgtctaaactgtgggacggttacagtctgctgtacctg
gagggccaagagaaggcccacaaccaggaccttggtttggctggttcctgtctcccacgg
ttcagcaccatgccctttctgtactgcaaccctggggacatttgctactacgccagcaga
aacgataagtcctactggctgtcaaccactgctcccctccccatgatgcctgtggaagaa
aaagaaatccagccgtacatcagccgttgctcggtttgcgaggctccgtcagtcgctatt
gcagttcacagtcaggacatcaccatcccacagtgtcccgtgggctggaggagcctgtgg
attggctactccttccttatgcatacggcagcgggaaacgaaggcggcggtcagtccctg
tcatcgcccggctcctgcctggaggacttccgcacaacgcctttcattgagtgtaacgga
gccaagggcacatgccactactttgctaacaagcacagcttctggctgacatccatagac
cagtcgttccatactcagccgtcatcggagacgctaaaggcgggccagctcctctcacgc
atcagccgctgtcaggtctgcatgaagaacctgtga
DBGET
integrated database retrieval system
