Poecilia formosa (Amazon molly): 103140389
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Entry
103140389 CDS
T07984
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103140389 (scaf4)
03041 Spliceosome [BR:
pfor03041
]
103140389 (scaf4)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103140389 (scaf4)
Spliceosome [BR:
pfor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
103140389 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103140389
NCBI-ProteinID:
XP_016528866
Ensembl:
ENSPFOG00000017108
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MEAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPIEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSGSGAASITHTEEPGSPPSPAKEPVTVVTANSTPTTAPPLHNS
DAFAAVAQLFQSSQGQQLQQMLQNFQQQAVKPETNTQPLLPTAQMPVQSAPTGLAAVAAQ
PHLSSPQPPPPVHSTQPVQQKTAFDMKLLDRFDYDDEPEAGEETKKDEPSSQPPFMQQPP
AFPQHLEHFNTQMMNLSQDITQQVSVPPNGQLQAGVVLPGQGYPVTMPTMGHTLPGHHIP
GSTGLPGFPGIYPPQNAAQQQQDSSVDMDHSSMRDGRHGRRSHSGSRSPKRRKSRSSSRS
RRSRHRRSRSRSRDRRHHSPRSRSQERRERERERERRQKGLPPPKSETLSICSTTLWVGQ
LDKRTQQQDVASLLEEFGQIESINMIPPRGCAYIVMIHRQDAYRALQKLSRGSSKVNQKA
IKIAWALNKGIKPDFKQYWDVELGVTYVPWSKIREDQLEELKEGGMLDMDTLSPDWSSMR
KTFDHLEEPTHNGRSEQQQPEEAQVLPMAVAASHPVQVPSLQQPMVAMGSLQPPVFPGPI
GMPPPGFAPGIPLPPFIRPGFNPLQMPPGFPASGPMPLGPIPPSKGGVDDPPQDPAGQGA
KKNDEVLEGPNLFNHQMGHMGPPGGFPGGPLTNSTGGHPVGLLVGHPGGPPVGHPGGPPV
GHPGGPPVGHPGGPPVGHPGGPPVGHPGGPPVGHPGGPPVGHPGGPPVGHPGGPPAGLPG
GPPAGHPGGPPAGHPGGPPVGHPGGPPVGHPGGPQVGHSGGPQVGPPGPGGHPGNIQSPL
GGLLGARPGMMPLQRPQGPPPSHMQRFPPPQGQRPPHPNVPPGPPQLIPRGPHPQMMRHE
PPQPKGGFGMPPPHNMRGPFPRGHGPPPQGPAPFTRPGGPRSFEGQEEMDERPPRGDRPG
FRDREQERDRDWDRDRDRERDRGFGGGRRFGDGGRGGGSDKMDGRDRLGGWQEDVGNSRG
GGWERDRDRDRDRDRRDWRERRGSLDRDRDRGRSDDGERDRGRAEGGERSRGEGGSRDKT
RAPEVKADKPRRSERRERTSRWDKDDRLAELENMDKFRSSNSTEQPGGTPLVTVETRKEP
NGEATKKKEESEHLLAGPIPAAENPQSSESKEPAQNESTATKEEKDAAAS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaacgcctttaaccaggagttattctccttgatggactccaagcctcct
atatctcgagcaaagatgatctccatcaccaaatcagccataaaagctatgaaactctac
aaacacgtggtccagattgtggaaaagtttatcaaaaagtgtaagcccgagtataaagtt
gctggcttgtatgtggttgattccattgtgaggcagtccaggcaccagttcggaccagac
aaagacgtgtttggtccgaggttcaccaaaaatatcacaggaaccttcgagaacctttgt
ctctgtcccatagaggaccggagtaagattgtgcgggttttgaacctgtggcagaagaac
ggagtgtttaagattgaggttattcagccgctcttggatatggctgcaggttctggcagt
ggtgctgcttccatcacacacacagaagagccaggttcaccaccatctccagccaaagag
cctgttaccgtagtaacagccaactccaccccaacaaccgctcctccactacacaactct
gacgcctttgctgccgtagcacagctcttccagtcttcgcagggccagcagctccagcag
atgctccagaactttcagcagcaggcggttaagcctgaaaccaacactcagcctcttctg
ccgaccgctcaaatgccggttcaaagcgcgcctactggcctggctgcggttgctgctcag
cctcacctctcctcgcctcagcctcctccacccgtccactccacccagccggtccagcaa
aagaccgcttttgacatgaagttgctggatcgttttgactacgatgatgaaccagaagct
ggagaggaaactaaaaaggatgaaccctcctcccagcccccttttatgcaacaacctcca
gcctttcctcagcacctggagcactttaatacacagatgatgaatctctcacaggacatc
acacagcaggtttcggtgcctcctaacggccagctgcaggctggtgttgttctgccagga
caaggctaccctgttactatgccaacgatggggcacactcttccagggcaccacattccc
ggttcaactgggcttccaggcttcccagggatataccctcctcaaaacgctgcccagcaa
caacaggactcctcagtggatatggaccattcttcaatgagagatggccggcatggtcga
cggtcacactcaggctcaagatctccaaagaggagaaagtctcggtccagttcccgctcc
cgacggtccaggcacagacgatctcgctcccgctccagagatcgtcgccaccactcgcct
cgctctcgctcacaggagcgccgggagagagagagagaaagagagcggcggcagaaaggc
ctgccgccgcccaagagcgaaactctaagtatttgtagtactacactctgggtgggtcaa
ctggacaagagaactcaacagcaagacgtcgcctcgttgcttgaagagtttggacagatt
gaatctataaatatgattcctccaagaggctgtgcttacattgtcatgatacacaggcaa
gatgcttacagagcactgcagaaactcagtagaggatcgtcaaaagttaaccagaaagca
attaagattgcttgggctttgaacaagggtataaagcctgattttaaacagtactgggat
gtggagctgggtgtcacctacgtaccctggtctaaaatcagagaggaccagttagaggag
ctgaaggagggaggaatgctagatatggataccttatcaccagactggagcagcatgaga
aagaccttcgaccaccttgaggaacccacacacaatggccgttctgagcaacagcagcct
gaggaggcacaagtcttaccgatggctgttgcagcttctcatcctgtacaagtcccttca
ttgcaacagccaatggttgctatgggttcccttcaacctccggtttttcctggtcccatt
gggatgcctccacctggctttgctccaggcattccccttcctcctttcatcagacctggc
ttcaacccgttgcaaatgcccccaggttttcctgcctcgggacctatgcccctcggtcca
atacctccttccaaaggtggcgttgatgacccgcctcaagacccagcaggtcagggcgcc
aagaaaaatgatgaggtcctggagggtccaaacttatttaaccaccaaatggggcacatg
ggacctccaggaggttttccaggtggacctctaactaattctactggtggtcaccccgtt
ggtcttcttgtaggacatcccggcggtcccccggttggacatcccggcggtcccccggtt
ggacatcccggcggtcccccggtcggacatcccggcggtcccccggtcggacatcccggc
ggtcctccggtcggacatcccggcggtcccccagttggacatcccggcggtcccccagtt
ggacatcccggcggtcctccggtcggacatcccggcggtcctccagccggacttcccggc
ggtcccccagccggacatcccggcggtcccccagccggacatcccggcggtcccccagtt
ggacatcccggcggtcccccagtcggacatcccggcggaccccaagtcggacattctggc
gggccccaagtcggacctccaggtccaggtggacaccctggaaacatccagtcccctctt
gggggtctactaggtgcccgacctggtatgatgccactccagcgcccccagggtccaccg
ccatcacacatgcaacgtttccctccaccccaagggcaaagaccacctcaccccaacgtg
ccccctggcccgccacagttgatacccagggggccacatcctcaaatgatgcgccacgag
cccccacaacctaaaggaggatttggaatgccccctccacataatatgagaggtcccttc
cctcgaggacatggcccgccccctcaaggtcctgccccgtttacaagaccaggtggtcct
agaagcttcgaagggcaggaggaaatggatgagagaccgcccaggggtgacaggccagga
ttcagggatcgagaacaggagagggacagagactgggatcgagacagagacagagagagg
gacagagggtttggagggggaaggcgttttggtgatggaggcagaggagggggtagtgac
aaaatggatgggcgggacaggctcggaggttggcaggaagatgtagggaattcccgtggg
ggcggatgggagagagacagagaccgagatcgggacagagatagacgggactggagagag
aggcgaggcagccttgatagagacagagatcgaggccgcagtgacgatggggagagagat
cgaggcagagcggagggaggagaaagaagcagaggagaaggaggcagccgggacaaaacc
agagcgcctgaagtcaaagcagacaaaccgagacggtcggagcgacgagagaggacgtcg
cggtgggataaagacgatcgactggccgaactggaaaacatggacaaattccggagctct
aacagcacggagcaaccgggtgggactcctctagttacggtggaaaccaggaaagagcca
aatggggaagccactaaaaagaaggaagagtcagaacatttactcgccggaccgattcca
gctgctgaaaatccccaatcctccgagtctaaagagccggctcaaaatgagtccacagca
acaaaagaagaaaaagatgctgcagcatcatag
DBGET
integrated database retrieval system
