Poecilia formosa (Amazon molly): 103142413
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Entry
103142413 CDS
T07984
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X2
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfor03016
]
103142413 (trub1)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103142413 (trub1)
Transfer RNA biogenesis [BR:
pfor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103142413 (trub1)
Prokaryotic type
103142413 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
103142413
NCBI-ProteinID:
XP_007558534
Ensembl:
ENSPFOG00000009950
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MNISQKTSMAGNVSGAAGPISSLSKLQSLNGLFAIYKKQGPTSADVLNKFKDTLLREAGV
QYPNSRKRKKQYLKLGHGGTLDSAASGVLVVGIGNGTKMLSTMLTGSKKYVAVGELGKAT
DTLDATGTVIMEKVFEHITRLDMEEKLKAFTGDIMQVPPLFSALKKDGQRLSVLLKKGHQ
VEAKPARPVTVHSLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELVRTK
QGQFTLQDHVLHEEQWTLQSVVGALQPCPEEDQRTDSPRSPQNAT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcacaaaaaacaagcatggctgggaatgtgagcggcgcagcgggaccaata
agttctctgtctaagcttcagtctttaaatggattgttcgccatatataagaaacaaggg
ccgacatctgctgatgtgttaaacaagttcaaagatactttgctcagagaggcgggagtg
cagtacccaaacagcagaaagaggaagaagcagtatctgaagttaggccacggagggacc
ctggacagcgctgctagcggagtcttggttgtcggtattgggaacgggacaaaaatgctc
agcacgatgttgactggttcaaagaaatacgtggctgtgggagaactgggaaaagcaaca
gatactcttgatgccactggaacggtgatcatggagaaagtgtttgagcacataaccagg
ctggacatggaggagaagttaaaagcttttactggggacattatgcaggttcctccactc
ttctccgccctgaagaaagacggccagcgtctgtctgtgttgttgaagaaaggtcaccag
gtggaggccaaacctgcacggcctgtcaccgtgcacagcctgacactgcaggagttcaaa
cctcctctcttcactctcgatattgaatgcggtggagggttttatgtcagaagcctggtg
gacgacctggggaaagctctgtcgtcgtgtgctcatgtgaaggagttggtcaggacgaag
cagggccagttcaccctgcaggatcacgtgttgcatgaggagcagtggacgctgcagagc
gtcgttggggcgctgcagccctgcccagaggaggaccagaggacggactctcccagatcc
ccacagaacgctacctaa
DBGET
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