Poecilia formosa (Amazon molly): 103142897
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Entry
103142897 CDS
T07984
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03410
Base excision repair
pfor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103142897 (pole)
03410 Base excision repair
103142897 (pole)
03420 Nucleotide excision repair
103142897 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfor03032
]
103142897 (pole)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103142897 (pole)
Enzymes [BR:
pfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103142897 (pole)
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
103142897 (pole)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
103142897 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
zf-RRPl_C4
APP_N
Motif
Other DBs
NCBI-GeneID:
103142897
NCBI-ProteinID:
XP_007559255
Ensembl:
ENSPFOG00000014344
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGANQENQDDGSSMSALKRLERSQFTDDMDARFGFDRMKEPGEKT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGSVISAEEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQIFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEV
CDEIKKKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLSREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNDKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPTSLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSKKLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQP
LQAGQAADMEDFGAAPRPLQPAILISTKRKRASQGGDSQVESQDVELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEPQPVGGGVIRGGPSTGLGSFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQDEGG
VAYRKVNRMLPRSNIVYYLYEYSVPEDMYQNHINEINADLSAPDIEGVYETQVPLLFRAL
VQLGCVCMVNKHIVRDLAGRETDSFDLDHLEMRSLAQFSYLEPGSVRHMYLYHHSQGQKA
LFGLFIPSQRKASVFILDTVRSNQMPNLSNVYTAERTALLEKTSEELLPPEKHTFEVRAE
NDIKAISRALQRILLNYKDERRGPTLIAVQSNWELQRLAAGMPVLEEFPVVPVHVVDEIN
YNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLR
KHNHLLWLSPTARPDLGGKEADDSRLVMENDEKGSVEINSQGCYSTACVELDLQSLAVNT
ILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSM
VVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKR
LGSTVVYGNFNRIILCTKKRRIDDAIAYVEYITNSIHSREIFHSLSISFSRCWEFLLWMD
PSNYGGVKGKLPSSVLYGEEGAKQKKRKQGEEDEEGSEDEDEDDAEEDDGDAETDEVEEL
IESNWNVMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRAGSQASQ
QAVGDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGTRSVTQSSEMFPVLPGSHL
PLNNPALEFVKYVCQVLSLDANIMNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHHCNFCRDLDLCKDPTVAQDGSVLPQWFCSNCQMQYETESIETALVDALQKKLMSYT
LQDLVCTKCKGVKEANMPLYCACAGNFDLTFSAKSFSEQTAVFRNIASHYNMRFLEETID
WLLEMSPQISQSRH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcggacgatacaaatcggacaggggccaaagtggagcaaaccaa
gaaaaccaggatgatggatcctccatgtcggctctcaagcggctggagcgcagccagttc
accgacgacatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacg
ggctggctgatcaacatgcaccctacggagatcctggatgaagacaaaaggatgatcagt
gccgtggactattattttatccaggaggacgggagcagattcaaggtggctcttcccttc
aagccttacttctacatagctactaaaaagaactgtgagagagaggtcatctcatatttg
tccaagaagttccaaggaaaagtggcgaaacttgaaattctcccaaaggaggacttggac
ctgccgaatcatctagttggactgaagagaagctacatcaagctgtcgttcaacaccgtg
gacgatctagttaaagtcaagcgtgagatttctccagccgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacatcaatgttgtcaagtgctctgtcaggaggcagcgtg
atctcagccgaagaggacgggacgttgaagagtatcgccgatcagctggacaacatcgtg
gacatgagagagtacgatgtcccttatcacgtccgagtgtccatcgacctcaagatccat
gtggctcactggtacaacgtccgataccgaggcagcgccttcccgccagagattgtgcga
cgagacgatctggtggagcgcccggacccagttgttttggctttcgacatcgaaaccacc
aaacttcctctgaaattcccagacgcagagacggatcagattatgatgatctcctacatg
atcgacggacagggctttctaatcacgaatagagagatcgtctccgagaacatcgaggat
tttgagttcactcccaagccagaatatgacgggcctttcacagtttttaacgaggatgac
gaggctgctctcatccagaggtggttcgatcacgttcaagaaacaaagccgaacatcttt
gtcacctacaacggagacttttttgactggccttttgtcgagactcgcgcggcgctccat
ggactgagcatgcacagggaaatcggcttccagaaagacaaccagggagagtataaatcc
agccaggccatccacatggactgcctcaggtgggtaaaaagggacagctacttgcctgta
ggaagtcacaacctgaaggcagcagccaaggctaaactgggctacgacccggtggagctg
gacccagaggagatgtgccgaatggcaactgaggaaccacagacgttagcaacctactct
gtgtcagacgctgtggccacatattacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccccatggagcctgatgaggtgctacgtaaaggttcaggcacc
ctgtgcgaagccttgctcatggtgcaggcgttccacgccaacatcgtcttccccaacaag
caggagcagatctttaacaagctgacggacgacggccacgtcctggactctgagacttac
gtgggcggccacgtggaggcgctggagtctggagttttccgcagcgacatcccctgtcgc
ttcaagatgaacccggctgcctttgactttctgcttcaaagagtcgagaggacgatgcgt
cacgccgtcgaagaggaagaaaagattcctctggagcaggttaccaactttaacgaggtt
tgtgatgaaatcaaaaagaagctaacatccttgaaggatgtcccaaacaggatcgaatgc
cccctcatctaccatctagacgtcggggccatgtaccccaatatcattctcacaaaccgt
ctgcagccatcagctatggttgatgaggccacatgtgctgcctgtgactttaacaaaccc
ggagccacctgccagaggaggatggcctggcagtggagaggagaaatcatgcctgcaagc
cgcagtgagtttcaccgcatccagcagcagctggagtcggagaagttcccacctctgttc
cccaacgggccccctcgggcgttccacactctgagccgggaggagcaggccaaacacgag
aagaaacgactggcagactactgcaagaaggcctacaagaagactcatgtcacgcggctt
gaggagcgagttaccaccatctgtcagagagaaaactccttctacgtcgacacagtcaga
gctttcagggatcgccgttatgaattcaaaggacttcacaaagtttggaagaagaagctg
tcaacagctcaggacaatggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctctgcagctggcccacaaatgtatccttaactctttctacggctacgtc
atgagaaaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcaccgga
gctaacatcataactcaggccagagaacttatcgaacaaatagggaggcctctggagctg
gacactgacgggatctggtgtgtcctccccaacaccttccctgagaactttgtggtaaaa
accagcaatgataaaaagcccaaagtgaccatctcttacccgggggccatgctcaacatc
ctggtgaaggagggattcaccaacgatcagtaccacgagctggtcgaccccacgtcgcta
acctacaacacccggtcagagaacagcatcttcttcgaggtggacgggccgtatctggcg
atgattctgcccgcctccaaagaggaagggaagaagctgaagaagaggtatgccgtgttt
aacgaggacggctcgttggctgagctcaagggctttgaagtgaagaggagaggagagctt
cagctcattaagatttttcagtcctctgtgtttgaggcgttcctcaaaggcaccactctg
gacgaggtctacgcgtcggtggccaaggtggccgactactggctggacgtcctctacagc
aaggccgccaacatgccggatgcggagctgttcgacctgatctcggagaaccgctccatg
tccaagaagctggaggaatacggcgagcagaagtccacgtccatcagcacggccaagagg
ctggccgagttcctgggagaccagatggtgaaggatgctggtctgagctgtcgctacgtc
atctcccggaaaccagagggttccccggtcacagaaagggccattcctctggccatcttc
caggctgagcccagcgtgaagaaacatttcctccggaagtggctgaagatgcccagcctg
catgacttggacatccgctctatcctcgattggagctattacattgagaggttgggcagt
gcaatccaaaaaattatcaccatccccgctgcgctacagcaagtgaagaatccagttccc
agagtgaggcaccctgactggctccacaagaaactcctggagaaaaacgacatctacaag
cagaagaaaatcagcgaactgttcaccagtgagggcaagagacagattgcccatcagccc
ctgcaggctggccaagctgcagacatggaggactttggggcggcgcctcgacccctgcag
cccgccatcctcatcagcaccaagaggaagcgggcttctcaaggaggggacagccaggtg
gagtcccaggacgtggagctcacgcagtcctggagggaaatcctgggacctccacctcca
atgggaaaaacgcgggaggagcgactggtgtggctgcgctatcacaagaaaaagtgggag
ctgcagctgaggcaaaggaaggagaagaagaagaggaggaagctgctggacggagaacca
cagccggtcggaggaggagtcatcagaggtggccccagcaccgggctgggaagcttcctg
cggcggacggcgcgcagcatcctggacatgccgtggcagattgtgcagattgcagagacc
aaccaccctggtctgtataagctgtgggctgtgattggaaacgatcttcactgcatgaag
ctcaacatcccgcgcgtcttctacgtcaaccagaaagtcccaaaacaggacgaaggagga
gtcgcgtacaggaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctgtat
gagtactcggtgccagaggatatgtatcagaaccacatcaatgagatcaacgctgacctc
tctgcaccggacattgaaggagtctacgaaacacaggtccccctgctgttccgtgcgctg
gtgcagctgggatgtgtgtgcatggtaaacaagcacattgtgagggatctggctggcagg
gagaccgactccttcgatctggaccatctggagatgagatctctggcccagttcagctac
ctggaacctggaagtgttcgccacatgtacctgtaccatcacagccaaggccagaaggct
ctgtttggcctcttcatcccctctcagcgcaaagccagcgtcttcatcctggacacggtc
agaagcaaccagatgcccaacctgagtaacgtctacaccgccgagcgcaccgccctcctg
gagaagacgtcggaggagcttctgcctccagaaaaacacaccttcgaggttcgagctgaa
aatgacatcaaggccatctcccgagctctgcagcgcatactgctgaactacaaggacgag
cgacggggacccaccctcattgctgtgcagtctaactgggagctgcagcggctggcagca
gggatgcctgtgctcgaggagttcccagtggttccagttcacgttgtggacgagatcaac
tacaatgtgctggactggcagcggcacggagcccgacgcatgatccgccattacctcaac
ctggacagctgcctgtcgcaggctttcgacatggccagatattaccaccttcctgtgggg
aacctgcctcaggatgtgtccatcttcggctcagacttgttcctggcgagacacctgcgg
aaacacaaccacctgctgtggctttctcccacagcgagaccagacctcggagggaaagag
gccgatgacagtcgtttggtcatggaaaacgatgagaagggctcagtggagataaactct
cagggatgttactccacagcgtgcgtggagctggacctgcagagcctggcggtgaacaca
atcctccagtcgcagcacgtcaacgacatggagggcggagccagtctgggcgtcagcttt
gatgtgatccagcaggcctcgctggaggacatgatgtcaggaaaccagggcgccagcgct
ctcgccagctacgacgagacggcgctctgctccaacaccttcaggatcttaaagagcatg
gtggtcgggtgggtgagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtg
atgcacttctaccgctggctgcgctctccgagttctctgctctacgacccggcgctgcat
cgcaccctgcacaacatgatgaagaaggtgtttctgcagctggttgcagagttcaaacgt
ctggggtcgactgtggtgtacgggaacttcaacaggatcatcttgtgcacaaagaaacga
aggatagacgacgctatcgcctatgtggaatatatcaccaacagcatacattcgagagaa
atcttccactctctgtccatctccttctcacgttgttgggagttcctgttgtggatggac
ccatctaactacggcggtgtgaagggaaaactgccttccagcgtcttgtacggagaggaa
ggagccaaacagaagaaaagaaaacaaggagaggaagatgaagagggcagtgaagatgaa
gatgaggatgatgctgaggaagatgatggcgatgcagagaccgacgaggttgaagagctg
attgagagcaactggaatgtcatgcattatctcccccaaacagcctcctgtcagaaatac
ttcctcatgattgtgtccgcctacatagctgcagtttaccacagcatgaaagaggagctg
agacgtaatgctcctggagcaacgccagtcaagcggcgcgcaggcagccaggcttcccag
caggcagtcggggacttgagtgcgcttcctggaatgatctccttctcccaggagtatgtg
gccagcgagctgacgcagaacattttcaccatcacccagaagatccagaaaaaggtgacc
gggaccaggagtgtaacccagagctcagagatgtttcctgtcctgcccggctcccatctg
ccgctcaacaatccggcgctggagttcgtcaaatacgtctgtcaggtcctttcgcttgat
gccaacatcatgaatcaggtgaacaaactgaagcgagacctcctgcgtctcgtggatgtc
ggagagttttcggaggaggcccagtttcgtgacccttgcaactcctacatactgccagaa
gtcatctgtcaccactgcaacttctgtcgggatctcgacctctgcaaggacccgactgtg
gcacaggatgggtcggtcttacctcaatggttctgctcaaattgccaaatgcaatatgaa
actgagtctattgagacggccctggtggatgctctgcagaagaaacttatgagctacact
ctgcaggatctggtctgcaccaaatgcaaaggggtgaaagaagccaacatgcccctttac
tgcgcgtgtgccggaaactttgacctcaccttctcagccaagagcttctccgagcagacg
gcagtgtttcgaaacatagcctcccactacaacatgagattcctggaggagaccatcgac
tggctgcttgagatgagccctcagatcagccagagcaggcactga
DBGET
integrated database retrieval system
