Poecilia formosa (Amazon molly): 103143399
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Entry
103143399 CDS
T07984
Symbol
col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103143399 (col25a1)
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103143399 (col25a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103143399
NCBI-ProteinID:
XP_016530731
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MEKEAKRHYRTTALNIISSLCSVASIAFCVHLSISAADIRSRVVGLESGTSERTFIQVRG
YSMEDFNSLVQQRVDELLSQRSYENFAKIRTARQASADCNCPPGPPGKRGRRGRDGEPGP
PGPPGPQGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP
PGPRGPPGDTGKDGPRGLPGLPGDPGQPGEIGLMGLEGPQGPKGSLGAPGIPGTDGLKGD
VGIPGQDGIPGAKGEKGEQGEKGDMGEDGPKGDMGEKGDAGSSAAGIKGEPGEPGRSGQK
GEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGEKGDHGPAGKGDRGEIGPAGPKG
SQGESGMPGPKGSKGDTGDKGDLGSIGPRGPPGQKGDRGATEIIDYNGNIEEALQRITTI
TVTGPPGPPGPIGPPGFKGDRGLPGLPGLDGERGFKGSKGDMGMPGASGEKGSTGLPGLP
GVNGAKGDKGDPGLPGPQGPSITGPPGPPGPHGPSGPMGPHGFPGPKGEPGLHGLKGMRG
EPGHKGDRGHMGLPGASGLDGKPGIRGTDGPPGPAGPAGPKGDIGEKGAPGEPGPRGPYG
LPGAAGTPGLDGLPGLKGDKGDDGGRGEKGFRGFKGEKGEPGQPGLDGLDAPCQLGPDGL
PMPGCWQKGVTPWLVA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagcgaagcgacactatcgcacgacagcgctgaacatcatctcgtcttta
tgttcagtggcgtccatcgcgttctgcgtccatctgagcatcagcgcggcggacatcagg
agccgagttgtgggtttggagagcgggacgtcggagcgcaccttcatccaggtccgcgga
tactccatggaggatttcaattctctggtgcagcagagagtggatgagttgctttctcag
cgctcttacgagaatttcgccaagatcaggacggcaagacaagcctcagctgactgtaac
tgccccccaggacctcctggtaagagaggaaggagaggccgcgacggagagcctggtcct
cctggtcctccaggtccacagggagaaaagggagatcaaggtgaccagggaccacggatg
gtcttcccaaagatcaatcatggctttctttccgctgaccagcagctcataaagcgtcgg
ctcattaagggagatcaaggccaggcaggaccacccgggcctccaggcccacctggcccg
ccaggaccaaggggccctccaggggacactggaaaggatggacccagaggtttgccgggt
ctaccaggtgatccaggccagccaggagaaattggactcatgggacttgaggggcctcaa
gggccaaagggttcactgggggctcctggtatccctggaacagatggactgaagggagat
gttggcatcccaggacaggacggaatcccaggggccaagggtgaaaagggagaacagggt
gaaaagggcgatatgggtgaagacggaccgaaaggtgacatgggcgagaagggtgatgca
ggctcctctgcagcaggcatcaagggcgaaccgggagaacctggacggagcggacagaag
ggagagccaggacttccagggctgcctggactcccagggataaagggtgagccaggattc
ctcggcccccagggagaaccaggacttccaggactcccaggaactaaaggcgagaaaggt
gaccacggaccagcaggaaagggtgatcgaggagaaatcggacctgctgggccaaagggt
tcacaaggagagtctggtatgcctggacctaaagggtcaaagggggatactggagataaa
ggagatttgggatctattggcccaagaggtcctcctgggcagaaaggagacagaggagcc
actgaaatcatcgactacaatggaaacatcgaagaagctctgcagaggattaccactatt
acagtcacgggtcctcctgggccacccggaccaataggaccaccaggctttaagggagat
cgcggtctccctggtcttcctggactcgatggggagagaggttttaaaggttccaaggga
gacatgggaatgcccggagcgtcgggggagaaaggaagcactggtttacctggcttacct
ggcgttaacggagcaaaaggagacaaaggagatccaggacttccaggtccacaaggtcca
tctataactggccctccggggccaccgggaccccacgggccctcgggacccatgggaccc
catggcttcccagggcctaagggagaacctggtttgcacggactgaagggcatgagaggg
gaaccgggacacaaaggagatcgtggccacatgggtctccctggagcctccggcttggac
ggcaagcccggaattaggggcacagacgggcctccgggtccagctggtccggccgggccg
aagggtgacattggtgagaaaggcgcaccaggtgagccgggacctcgaggaccttatgga
ctacctggagctgccggaacgcctggtttggatgggttacctggattaaaaggagataaa
ggcgacgatggggggagaggagaaaagggtttccggggatttaagggtgaaaagggggaa
ccagggcagccaggtctggacgggctggatgccccgtgccaattgggtccggatggatta
ccaatgcctggatgctggcagaagggagtcacaccatggcttgtagcctga
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