KEGG   Poecilia formosa (Amazon molly): 103143399
Entry
103143399         CDS       T07984                                 
Symbol
col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
pfor  Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:pfor00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pfor00536]
    103143399 (col25a1)
Glycosaminoglycan binding proteins [BR:pfor00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103143399 (col25a1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103143399
NCBI-ProteinID: XP_016530731
LinkDB
Position
Unknown
AA seq 676 aa
MEKEAKRHYRTTALNIISSLCSVASIAFCVHLSISAADIRSRVVGLESGTSERTFIQVRG
YSMEDFNSLVQQRVDELLSQRSYENFAKIRTARQASADCNCPPGPPGKRGRRGRDGEPGP
PGPPGPQGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP
PGPRGPPGDTGKDGPRGLPGLPGDPGQPGEIGLMGLEGPQGPKGSLGAPGIPGTDGLKGD
VGIPGQDGIPGAKGEKGEQGEKGDMGEDGPKGDMGEKGDAGSSAAGIKGEPGEPGRSGQK
GEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGEKGDHGPAGKGDRGEIGPAGPKG
SQGESGMPGPKGSKGDTGDKGDLGSIGPRGPPGQKGDRGATEIIDYNGNIEEALQRITTI
TVTGPPGPPGPIGPPGFKGDRGLPGLPGLDGERGFKGSKGDMGMPGASGEKGSTGLPGLP
GVNGAKGDKGDPGLPGPQGPSITGPPGPPGPHGPSGPMGPHGFPGPKGEPGLHGLKGMRG
EPGHKGDRGHMGLPGASGLDGKPGIRGTDGPPGPAGPAGPKGDIGEKGAPGEPGPRGPYG
LPGAAGTPGLDGLPGLKGDKGDDGGRGEKGFRGFKGEKGEPGQPGLDGLDAPCQLGPDGL
PMPGCWQKGVTPWLVA
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggagaaagaagcgaagcgacactatcgcacgacagcgctgaacatcatctcgtcttta
tgttcagtggcgtccatcgcgttctgcgtccatctgagcatcagcgcggcggacatcagg
agccgagttgtgggtttggagagcgggacgtcggagcgcaccttcatccaggtccgcgga
tactccatggaggatttcaattctctggtgcagcagagagtggatgagttgctttctcag
cgctcttacgagaatttcgccaagatcaggacggcaagacaagcctcagctgactgtaac
tgccccccaggacctcctggtaagagaggaaggagaggccgcgacggagagcctggtcct
cctggtcctccaggtccacagggagaaaagggagatcaaggtgaccagggaccacggatg
gtcttcccaaagatcaatcatggctttctttccgctgaccagcagctcataaagcgtcgg
ctcattaagggagatcaaggccaggcaggaccacccgggcctccaggcccacctggcccg
ccaggaccaaggggccctccaggggacactggaaaggatggacccagaggtttgccgggt
ctaccaggtgatccaggccagccaggagaaattggactcatgggacttgaggggcctcaa
gggccaaagggttcactgggggctcctggtatccctggaacagatggactgaagggagat
gttggcatcccaggacaggacggaatcccaggggccaagggtgaaaagggagaacagggt
gaaaagggcgatatgggtgaagacggaccgaaaggtgacatgggcgagaagggtgatgca
ggctcctctgcagcaggcatcaagggcgaaccgggagaacctggacggagcggacagaag
ggagagccaggacttccagggctgcctggactcccagggataaagggtgagccaggattc
ctcggcccccagggagaaccaggacttccaggactcccaggaactaaaggcgagaaaggt
gaccacggaccagcaggaaagggtgatcgaggagaaatcggacctgctgggccaaagggt
tcacaaggagagtctggtatgcctggacctaaagggtcaaagggggatactggagataaa
ggagatttgggatctattggcccaagaggtcctcctgggcagaaaggagacagaggagcc
actgaaatcatcgactacaatggaaacatcgaagaagctctgcagaggattaccactatt
acagtcacgggtcctcctgggccacccggaccaataggaccaccaggctttaagggagat
cgcggtctccctggtcttcctggactcgatggggagagaggttttaaaggttccaaggga
gacatgggaatgcccggagcgtcgggggagaaaggaagcactggtttacctggcttacct
ggcgttaacggagcaaaaggagacaaaggagatccaggacttccaggtccacaaggtcca
tctataactggccctccggggccaccgggaccccacgggccctcgggacccatgggaccc
catggcttcccagggcctaagggagaacctggtttgcacggactgaagggcatgagaggg
gaaccgggacacaaaggagatcgtggccacatgggtctccctggagcctccggcttggac
ggcaagcccggaattaggggcacagacgggcctccgggtccagctggtccggccgggccg
aagggtgacattggtgagaaaggcgcaccaggtgagccgggacctcgaggaccttatgga
ctacctggagctgccggaacgcctggtttggatgggttacctggattaaaaggagataaa
ggcgacgatggggggagaggagaaaagggtttccggggatttaagggtgaaaagggggaa
ccagggcagccaggtctggacgggctggatgccccgtgccaattgggtccggatggatta
ccaatgcctggatgctggcagaagggagtcacaccatggcttgtagcctga

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