Poecilia formosa (Amazon molly): 103143410
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Entry
103143410 CDS
T07984
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like isoform X2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103143410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103143410
03009 Ribosome biogenesis [BR:
pfor03009
]
103143410
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103143410
Spliceosome [BR:
pfor03041
]
Complex A
U2 snRNP components
U2 related factors
103143410
Complex B
103143410
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103143410
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
90S particles
Helicases
103143410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
SRP54
AAA_25
AAA_29
AAA_7
Motif
Other DBs
NCBI-GeneID:
103143410
NCBI-ProteinID:
XP_007560008
Ensembl:
ENSPFOG00000000949
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MRRDRDRDRDRNRDRTGNRGQDAMSGGDPVASAAASWSFANRPPVQQQTNPFTNLPHTPR
YHEILQKRLRLPVWEYRDVFTDILMRNQSFVLVGETGSGKTTQIPQWCVDMVRSLQGPRR
AVACTQPRRVAAMSVAQRVSDEMDVVLGQEVGYSIRFEDCSSAKTVLKYMTDGMLLREAM
NDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDN
CPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDVLLFLTGQEEIDEAC
KRIKREVDNLGPQVGDMKIIPLYSTLPPQQQQRIFEPPPPNKPSGAIGRKVVVSTNIAET
SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYT
EKAYRTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AALNDNGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEA
KKVADDAKMRFAHIDGDHMTLLNVYHAFKQNHESTQWCYDNFVNYRSLMSADNVRQQLSR
IMDRFSLPRNSGDFNSRDYYLNIRQALVTGFFMQVAHLERTGHYLTAKDNQVVQLHPSTV
LDHKPEWVLYNEFVLTTKNYIRTCTDVKPEWLVKIAPQYYEMSNFPQCEAKRQLEHIIAK
LSSKEYTQY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgacagagaccgtgatcgtgacaggaaccgggatcggaccggcaacaggggc
caagacgcgatgtcgggcggtgaccccgtcgcctcggccgcagccagctggagtttcgcg
aatcgacctcccgttcagcagcagacgaaccccttcaccaacctgccccacacgccgcgc
taccatgagatcctacagaagcggctgcggctcccggtctgggagtacagagacgtcttt
acggacatcctgatgcggaaccagtcgttcgtgctggtcggagagacgggctctggaaaa
accacgcagatcccacagtggtgtgtagacatggtgcgttcgctgcaggggccgaggaga
gcggtggcctgcacccagcccaggagggtggcggcaatgagcgtcgcccagagggtgtct
gatgagatggatgtggtgctgggtcaagaggtgggctactccatcaggtttgaggactgc
agctctgccaaaactgtgttaaagtacatgacagatggaatgttgctgcgggaggctatg
aacgatcccctgctggagcgttatggtgtcatcattctggacgaggcccacgaacgcaca
ttagccaccgacatcctcatgggggttctcaaggaagtagtgcgccagaggtctgacctc
aaggtcatcgtcatgagcgcaacgctggacgccgggaagttccaagtgtactttgacaac
tgcccgctgctaaccatccccggacgcacgcaccccgtggagatcttctacacaccggag
cccgagcgagactacctggaggcggccatccgcaccgtgatccagatccacatgtgcgag
gaagaagagggcgacgttctgctcttcctcactggacaggaggaaatcgacgaagcctgc
aagcgaatcaagcgtgaggtcgacaacctggggccacaagtcggcgatatgaaaatcatc
cccctgtactccacgctgccgccgcagcagcagcagaggatctttgagccgcctccgcca
aacaagccaagcggcgctattggaagaaaggtcgtcgtgtcaacaaacatcgccgagacg
tccctgaccatcgacggagtggtgtttgtaattgatcccggatttgccaagcaaaaggtg
tacaacccacgcatcagagtggaatcccttctggtcaccgccatcagcaaggcctcggct
cagcagagagcgggtcgcgccggacggacgcgcccgggaaaatgtttccgcttgtacacg
gagaaagcctacaggacagaaatgcaggacaacacatatccagagatcctgaggtctaat
cttggctccgtggtgctgcagctgaagaaactgggcatcgacgatcttgtgcactttgac
ttcatggaccctccagccccggagaccctgatgcgagcgctggagctgctgaactacctg
gcagcgctcaacgacaacggcgacctgaccgagctgggctccatgatggcggagttcccc
ctggacccgcagctcgccaagatggtcatcgccagctgcgaattcaactgctccaacgag
atcctctccatcaccgccatgctgtcagtcccacagtgcttcgttcgacccacggaggcc
aagaaggtggccgatgatgccaagatgcgctttgcccacatcgacggagaccacatgacg
ttactcaacgtttaccatgcctttaagcagaaccacgagtccacccagtggtgctacgat
aactttgtgaactaccgctcgctgatgtcggcggacaacgtccggcagcagctgtcgagg
atcatggatcgcttcagcctgccaagaaacagcggcgatttcaacagcagagactattat
ctcaacatccgacaagcgctggtcaccggcttcttcatgcaggttgctcaccttgagcgc
accggccattacctgacggcaaaggacaaccaggtggtgcagctgcacccctccactgtg
ctggaccacaaacctgagtgggtgctctacaacgagttcgtcctcaccaccaagaactac
atccgcacctgcacagacgtcaagcccgagtggctggtgaaaattgccccgcagtactac
gagatgagtaacttccctcagtgtgaagcaaaaagacagttggagcatattattgcaaaa
ctctcatccaaggaatacactcagtactaa
DBGET
integrated database retrieval system
