Poecilia formosa (Amazon molly): 103143525
Help
Entry
103143525 CDS
T07984
Symbol
ercc3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03022
Basal transcription factors
pfor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103143525 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
103143525 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103143525 (ercc3)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103143525 (ercc3)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103143525 (ercc3)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103143525 (ercc3)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103143525 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
103143525
NCBI-ProteinID:
XP_007560155
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MGKRDKEKKSKKRYYEEEDDEDDVTGSEPQEAVPAAAGKQVDESGTKLDEYGAKDYRSQM
QLKKDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPNHVHEYKLTAYSLYA
AVSVGLQTSDIVEYLQKLSKTSVPDGIVQFIKLCTVSYGKVKLVLKHNRYFVESAFPDVI
QNLLQDNLIRECRLRGADGSDPELITEVIHSKSVISKAVQDKGGASTSQQPSDGQTSSQQ
VPEDIFSYYEQMDKEEEEEEETQTVSFEIRQEMIEELQKRCIQMEYPLLAEYDFRNDTVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSSVSVEQWKSQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
EKVMEWMRTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIRFHERRNDKIIVFADNVFALKEYAIRLNKPFIYGPTSQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAYFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLMFSSREEQQQLLQKVLAASDLD
AEEEVVAGEVGARPQFSRRVGTMSSMSGADDTVYMEYQSRSNKASAGSKSVHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagggataaagagaagaaatccaagaaacgttattatgaggaggaagacgat
gaagatgacgtgaccggcagcgagcctcaggaagccgtgccagcggctgcaggaaagcag
gtggacgagtctgggaccaagcttgacgagtatggagccaaagactaccgctctcagatg
cagctcaagaaagaccactcttcacgcccactctgggtggctccagatggacacatcttt
ctggaagcgttctctccggtgtataagtatgctcaggatttcctagtggccatcgcagag
cctgtgtgcagacctaaccacgttcatgagtacaagctgaccgcgtactcgctgtacgca
gcggtcagcgtggggctgcagacttcagacatcgtggagtacctgcagaagctcagcaag
acgtctgtaccggacggcattgtgcagtttatcaaactttgcactgtgagctatgggaaa
gtcaagcttgtgcttaagcacaacaggtatttcgtagaaagtgctttccctgacgtcatc
cagaatctcctgcaggacaacctgatccgtgaatgtcgcctgcgaggtgcagacggttcg
gaccctgagctcattaccgaggtcatccacagcaagtcagtgatttctaaggctgtccag
gacaaaggaggtgcctccacctcacagcagcccagcgatggacaaacgtcgagccagcag
gtccctgaggacatcttcagctactatgagcagatggataaagaggaagaagaggaagag
gagacccagactgtgtcttttgaaattcgccaggaaatgatagaggagctgcagaagcgt
tgcattcagatggagtaccccctcctagctgagtacgactttcgaaatgacaccgtcaac
cccgacatcaacattgacctgaagcccaccgccgtgctgcggccctaccaggagaagagc
ctgcgcaagatgtttggaaacggccgcgcacgatcgggagtgatagtgctgccctgcgga
gcgggtaagtctctggtgggcgtgaccgccgcgtgcaccgtgcgtaagcgctgcctggtg
ctgggcaactcctccgtctccgtggagcagtggaagtcccagttcaagatgtggtccacc
atcgacgactcccagatctgccgcttcacctccgatgccaaggataagcccattggctgc
tcagtggccatcagcacctactccatgttgggtcacaccaccaagcgatcctgggaggca
gagaaggtcatggagtggatgcggacgcaggaatggggacttatgatcctggatgaggtc
cacaccatccctgcaaagatgtttcgacgtgtcctgaccatcgtccaggcccattgcaaa
ctgggcctcaccgccacactggtcagggaagacgacaagattgtggatctcaacttcctt
attggccctaagctgtatgaagccaactggatggagctgcagaacaacggctatatcgcc
aaagttcagtgtgcagaggtgtggtgcccgatgtccccggagttttacagagagtacgtg
gccattaagacaaagaagcgcattctgctgtacacgatgaaccccaacaagtttcgggcc
tgccagtttctcatccgcttccacgagcggcgcaatgacaagatcatcgtcttcgccgac
aacgtctttgccctgaaggaatacgccattcgactcaacaagcctttcatctacggtccc
acttctcaaggggaacgaatgcagattttacagaactttaaacacaatccaaagatcaac
accattttcatctctaaggttggagacacttcttttgacttgccagaagccaatgttctg
atccagatctcctcccatggtggctcgcgcagacaggaggcacagagacttggcagagtc
ttaagagccaagaaaggaatggtggctgaggagtacaatgcatacttttattccctggtg
tcccaggacacccaggagatggcttattccacaaagaggcagagattcctggtggaccag
ggatacagcttcaaggtaattacaaagttagcaggtatggaagaagaggacctgatgttc
tccagcagagaggagcagcagcagctgctgcagaaggtgctcgctgcgtcagacctggat
gctgaggaggaagtggtggcaggcgaagtgggagcacgaccccagttctcccggcgagtg
ggcaccatgagctccatgtcgggtgcagacgacacagtctacatggaatatcaaagccgg
agcaacaaagcctctgcagggagcaagagcgttcacccactgttcaagcgcttcagaaag
tag
DBGET
integrated database retrieval system
