KEGG   Poecilia formosa (Amazon molly): 103143825
Entry
103143825         CDS       T07984                                 
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pfor  Poecilia formosa (Amazon molly)
Pathway
pfor03018  RNA degradation
pfor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103143825 (lsm4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103143825 (lsm4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfor03019]
    103143825 (lsm4)
   03041 Spliceosome [BR:pfor03041]
    103143825 (lsm4)
Messenger RNA biogenesis [BR:pfor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103143825 (lsm4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103143825 (lsm4)
Spliceosome [BR:pfor03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103143825 (lsm4)
SSDB
Motif
Pfam: LSM UNC119_bdg
Other DBs
NCBI-GeneID: 103143825
NCBI-ProteinID: XP_007560591
Ensembl: ENSPFOG00000000570
UniProt: A0A087X410
LinkDB
Position
Unknown
AA seq 188 aa
MHVFSSRGQHYKIWSANIRRRRRSVGGKSRVIHRRRQEIETNIIIMLPLSLLKTAQNHPM
LVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEI
IDMVKEEVVSKGRGRGGAQQNKQQGKGRGGPGRGVFGARGRGMSGPGRGQQPPTDKKTGK
AQGMKNQH
NT seq 567 nt   +upstreamnt  +downstreamnt
atgcacgttttcagcagcagggggcagcactataagatatggtccgctaacattaggagg
cgaagaagaagtgtaggtgggaaaagccgtgttattcatcgcaggagacaagaaatagaa
acaaatataatcataatgcttccattgtctctgttgaaaactgcccagaaccatcccatg
ctggttgagcttaagaatggggaaacctacaacggccacctggtgagctgcgacaactgg
atgaacatcaacctgagagaagtcatctgcacatccagggatggagacaagttctggagg
atgcccgagtgctacatccgaggaagcacgatcaagtacctgcggatccccgatgagatc
atcgacatggtgaaggaggaggtggtgtcgaaggggcgcgggcgcggcggcgcccagcag
aacaagcagcagggcaaaggaagaggaggacccggccgaggtgtgtttggcgcccgcggc
agagggatgtccggtccggggcggggccagcagccgccgaccgataagaaaacaggaaaa
gctcagggaatgaagaaccagcactga

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