Poecilia formosa (Amazon molly): 103144094
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Entry
103144094 CDS
T07984
Symbol
sox13
Name
(RefSeq) transcription factor SOX-13 isoform X3
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfor03000
]
103144094 (sox13)
Transcription factors [BR:
pfor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103144094 (sox13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
103144094
NCBI-ProteinID:
XP_007560957
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All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MTCVSSSVPGRERFWIPAHPPGPARMVEPSPSALHLLSGGDVRMADIGVKVEQEECGGDS
GAKTNSEHPRTLHDWSTSQPLETRQLTPPLSRSPSEGSPGKEPPHKQSPMGAKEAGIHER
SEGQAKIKEVMPTIEKLLNTDWKEKLLDKSSVGAGQLKGTPESLAEKELQLLMMINQLSG
LREQLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQ
VNMPYVMIPAFHPNTQTLPVSSDPPMTLPLQPIPCKPTVDYPMQLLPNSHHTPIKRSSSS
FRQEASQPLNLTSKPKGMELGKTSSPLSLELGSVGSMQGAYRPREVSRSPPRPALSFLGD
GDVVTQAIHDAQQLLRSHSSGGRDRDQYRDRERERDGSGKMEYKGSPHAEKISHCERGEE
RHGEEHLSSDSEGGALPVSVPGSYSETRPTSSTGHIKRPMNAFMVWAKDERRRILQAFPD
MHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRL
RVGEYKAMMKSRRQEQRATYTHSQSEPQQIQYSQSDQYPAGGSISVPGLPFHPALLEHYL
PQAPPPARRSEDRATPTPLPRDRERERVQERERERERERERERKRERLPYSEGEESDVGE
RSEGELVLLTD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgtcagcagctctgttccaggcagggagcgattttggatccccgcacatcca
cccggccctgccagaatggttgagcccagcccttcagctctgcacctcctctccggtggg
gatgtacgcatggcggacatcggtgtcaaagtggaacaggaggaatgcggcggagacagc
ggagccaaaaccaactcggagcaccccaggactctgcacgactggtcaacaagtcagcct
ctagagacgcgccagctgacccccccactgtcacgctccccttcggagggctctccagga
aaggagccacctcacaagcaaagccccatgggagcgaaggaagccgggattcacgagcga
tcagaggggcaagccaaaattaaggaagtaatgccgaccatcgagaagctgctgaacacc
gactggaaggagaaacttctggataaaagctcagtgggcgcaggacaactcaaaggcact
ccggagtctctggcggagaaggagctgcagctgctgatgatgatcaaccagctgagcggc
ctgagggagcagctgctgggcgcccactcagagcagaggaacatggccgccctgctgctg
gagaagcagcagcagcagatggagctggcccggcagcagcaggagcagatcgccaagcag
cagcagcagctgatccagcagcagcataagatcaacctgcttcagcagcagatccagcag
gtgaacatgccctacgtgatgatcccggctttccaccccaacacccagaccctccccgtc
tcctcagaccccccgatgacattgcctctgcagcccatcccctgcaagccgacggtcgac
taccccatgcagctgctcccaaacagccaccacacgcccatcaagaggagcagcagctcc
ttccgccaggaggcgagccagccgctgaacctgacctccaagcccaaggggatggagctg
gggaagacgtccagccctctgagcctggagctgggatcagtgggatccatgcagggcgcc
tacagacccagagaggtgtcccgcagcccgccgcggcccgccctcagtttcctaggagac
ggcgacgtggtcacccaggccatccatgatgcccagcagctcctgaggagccacagcagc
ggagggagagacagggaccaatacagagacagggagagagagagagacggttctggaaaa
atggaatataaaggttctcctcatgcagaaaaaataagtcactgtgagcgcggtgaagag
aggcacggcgaggagcatctcagcagtgactctgaggggggggccctgcccgtctctgtt
cctggcagctactccgagacccggcccacttcctctaccggccacataaagagacccatg
aatgctttcatggtgtgggccaaggacgagcgcaggaggatcctccaggctttcccagac
atgcacaattcctccatcagcaagatcctaggctccaggtggaagtccatgtccaaccag
gagaagcagccatactatgaggagcaggcgaggctgagcaggcagcacctggagcgttac
cccgactacaagtacaagccccgacccaaacggacctgcattgtggagggccgaaggctg
agggtgggcgagtacaaagccatgatgaagagccgcaggcaggagcagagggccacctac
acacacagccaatcagagccgcagcagatccagtactcccagagcgaccagtacccagcc
ggcggctccatctccgtcccaggcttaccgtttcacccggcactgctggagcactacctg
ccgcaggcccctccccccgcccgcaggtctgaggaccgggccacgcccaccccactgccc
agggacagggaaagagagagggtgcaggagagagagagggagagagagagggagagagag
agggaaagaaagcgagagcgactgccgtacagcgaaggagaagaaagcgacgtgggagag
aggagtgaaggggaactggtgctgctcacagactga
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