Poecilia formosa (Amazon molly): 103144197
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Entry
103144197 CDS
T07984
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103144197
03016 Transfer RNA biogenesis [BR:
pfor03016
]
103144197
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103144197
Spliceosome [BR:
pfor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103144197
Transfer RNA biogenesis [BR:
pfor03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103144197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SPRY
DEAD
CMS1
ResIII
DUF5766
Motif
Other DBs
NCBI-GeneID:
103144197
NCBI-ProteinID:
XP_007561122
Ensembl:
ENSPFOG00000006873
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
RLSLLVCLAIGPDGLCCQSREFKEWHGCRSTKGVTKGKYYYEVTCNDQGLCRVGWSTSQA
ALDLGTDKYGFGFGGTGKKSNNKQFDSYGEEFTMHDTIGCYLDLDKGQISFSKNGNDLGS
AFDIPENLSSQGFFASCVLKNAELKFNFGGEDFKHPPKSGFVALDQAPESHTIKSSQTGS
AKVTQVKASSNAPKALIIEPSKELAEQTFNNVKQFKKNVENPKLRELLVIGGVAAKEQLA
VLEQGVDIVVGTPGRLDDLVSTGKLSLSQVRFLVLDECDGLLTAGYTDFINRIHKQIPQV
TSDGKRLQVIVCSATLHSFDVKKLSERIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADR
QWERLGKNHVRTDEVHAKDNTRPGANTPEMWSEAIKKLKGEYTVRAIKEHKMDQAIIFCR
TKIDCDNMEQYFIQQGGGPDSKGHQFSCVCLHGDRKPNERKNNLDRFKRKDVKLLICTDV
AARGIDVSGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAMEKEKVWYHVCQNR
GRGCYNTRLKEDGGCTIWYNEKELLSEIEEHLKCTITQCDTDIKVPVDEFDGKVTYGQRR
ALGGGNYTGHVDVLAPTVQELAVLEREAQTSFLHLGYMPNQLFRAF
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
cgtctctctttgctggtctgcttagcaatcggccccgacggactctgctgccagagcagg
gagttcaaagagtggcacggctgccgctccaccaaaggtgtcacaaaagggaagtactac
tatgaggtaacctgcaatgaccagggtctctgccgggtgggttggtctaccagtcaagct
gctctggatttgggaactgacaagtacggctttggttttggtgggaccggaaagaaatcc
aacaacaagcaatttgacagctacggggaggagtttaccatgcatgacactatcgggtgc
tacctggatttagacaaggggcagatctccttctctaaaaatggaaacgacctgggttca
gcttttgacatccctgaaaatttaagtagccagggctttttcgcttcgtgcgtcctgaag
aatgctgagctgaagttcaactttggaggagaagatttcaaacatccccctaaaagtggg
tttgtcgctctggatcaggcaccggagagtcacaccattaaatcttcccaaacaggcagt
gccaaagtgactcaagtgaaggcttcatcaaacgcacccaaagccctgatcattgagcca
tccaaagagctggcagagcaaaccttcaacaatgtcaagcagtttaagaaaaatgtggaa
aatcccaagctaagggagcttcttgtgatcgggggtgttgcagctaaagagcagctagca
gttctggaacagggggtagacatagtggtgggaacacccggaagactggatgaccttgtt
tccaccggaaaactcagtctgtcccaagtccgtttcctggttctggatgagtgtgatggt
ctcctaacagccggatacacagacttcatcaacagaatccataaacaaatccctcaggtc
acctctgacggcaagagactgcaggtcatcgtgtgctccgccacactgcattccttcgac
gtgaagaagctctccgaacgcatcatgcattttcccacttgggtggacctaaaaggcgag
gactctgtcccggaaaccgtccaccacgtggtggtgccggtcaacccgaaggccgaccgg
cagtgggagcgcctcggcaagaaccacgtccggaccgatgaagtccacgccaaagataac
acccgaccaggagccaatacgccagaaatgtggtctgaagctatcaagaagctgaagggc
gagtacacggtcagggccatcaaagagcacaaaatggaccaggctataatcttctgtcgc
accaagatcgactgcgacaacatggagcaatacttcattcagcaaggaggaggtccagac
agcaaaggtcaccagttctcctgcgtttgccttcatggtgatcgaaagccgaacgagagg
aagaataacttggatcgcttcaagagaaaagatgtgaagctgctgatctgcacagacgtg
gccgccagaggaatcgacgtcagcggcgttccttatgtgattaatgtcaccctgcctgac
gagaagcagaactatgtccatcgtatcggcagagttggtagagcagagagaatgggactt
gccatctccctagttgctatggaaaaagaaaaggtgtggtaccacgtttgtcagaaccga
gggagaggctgctacaacacccgactgaaggaggacggagggtgcaccatatggtacaac
gagaaagagcttctgtctgaaatcgaggagcatctgaaatgcaccatcactcagtgtgac
acggatattaaagtgcctgtagatgagtttgacggaaaagtgacttatggacagcgcaga
gctcttggaggcggaaactatacgggtcacgtggacgttctggccccgacagtccaggag
ttggccgtccttgagagagaagctcaaacatcttttcttcatttaggatacatgccaaac
cagctgttcagggccttctaa
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