Poecilia formosa (Amazon molly): 103144574
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Entry
103144574 CDS
T07984
Symbol
rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03320
PPAR signaling pathway
pfor04148
Efferocytosis
pfor04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103144574 (rxra)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103144574 (rxra)
03320 PPAR signaling pathway
103144574 (rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfor03000
]
103144574 (rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pfor03310
]
103144574 (rxra)
Transcription factors [BR:
pfor03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103144574 (rxra)
Nuclear receptors [BR:
pfor03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103144574 (rxra)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
103144574
NCBI-ProteinID:
XP_007561687
Ensembl:
ENSPFOG00000011556
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
METKPFLSLGFLKPQCSLAPPMQRGRSSEACSCFSGVCPLHQRRLSSDSSGQVTSSPLGS
PTSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLTSPFSVISSPMGPHSMNSPGMGY
GPSISPQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSGKH
YGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREVLL
HAAVQEERQRAKDKNENEVESTSCANEDMPVEKILEAEEAVEPKTETYIETNLGMPSNSP
NDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVK
DGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSK
GLSNPGEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQMT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcctgtcattggggtttttgaagccccagtgctcattggctccc
cccatgcaacgaggtcgttcgtctgaggcgtgttcatgtttcagcggtgtttgtcccctc
catcagcgtcgcctatcctcagattcttcaggacaggtgacctcctcacctttaggctct
cctacttcccatcgtggaatgcatccctctttgctgagccccacctccatgggaccctct
ggctctctccattctcccatcagcaccctgagttcaccgatgaacggcctcacctcaccc
ttctcagtcattagctcacccatggggccgcactccatgaactcacctggaatgggctac
ggccccagcatcagcccacagttgaactctccgatgaactcggtcagcagcacggaggac
attaagcccccgctgggcctcaatggcgtgatgaaggtgcccgctcagccctcaggcacg
gctctgtcgctcaccaaacacatctgcgccatctgcggcgaccgctcctcaggaaagcac
tatggtgtctacagctgtgaaggctgcaaaggcttcttcaaacgaaccgttcgcaaggac
ttgacctacacctgccgcgacaacaaggactgtgtcatcgataagcgccagaggaaccgc
tgtcagtactgccgctaccagaagtgcttggccatgggcatgaagagagaagttttgtta
catgcagccgtccaggaggagcgccagcgggccaaggacaagaacgagaacgaggtggag
tccaccagctgcgcgaacgaggacatgcccgtggagaagatcctggaggccgaggaggcg
gtggagcccaaaaccgagacctacatcgagaccaacctggggatgccgtccaactcgccc
aacgacccagtgacaaatatctgtcaggcagcagacaagcagctttttactctggtggag
tgggccaagaggattccccacttctcggagctgccgctggacgaccaggtcatcctgcta
cgagcaggttggaatgaactcctcattgcatcattttcgcaccgttccatcgcagtaaag
gatgggattctgttggcgacgggcctgcacgtgcatcgcaacagcgcccatagtgccgga
gtgggagccatctttgacagggtgctcacagagctggtgtcaaagatgagagacatgcag
atggataagactgagctgggttgcctccgagccatcgtccttttcaacccagactctaaa
ggtttgtccaacccaggtgaggttgaagctctgagagagaaagtctacgcgtctttagag
gcttactgcaaacagaaataccccgagcagccgggcaggttcgctaagctgttgctacgg
ttaccagcgctgcgctccatcgggctcaagtgtttggagcaccttttcttcttcaagctg
attggcgacacacccatcgacaccttcctcatggagatgctagaagctcctcatcaaatg
acataa
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