Poecilia formosa (Amazon molly): 103145126
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Entry
103145126 CDS
T07984
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103145126 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103145126 (msh2)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103145126 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
103145126
NCBI-ProteinID:
XP_007562484
Ensembl:
ENSPFOG00000009659
UniProt:
A0A087XVQ6
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MAVQPKQNQNLSLDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVF
KTNGVIKYLGSGSRKLESVILSKLNFEAFVKDLLLVKQYRVEVYRNHSKSSKEHDWRIEY
KASPGNLTQFEDILFGGGTGGEGCAGVVAVRFATGADGQRVVGVGYVDAAQRTMGVCEFP
DNEIFSNLESLLVQISPKECLLTQGECSAEGTKLREVVQRGGVLVSDRKRAEFSSKDIVQ
DLNRLLRSKRGETVASNTLPELDKQVAMSCLAAVVRFLELLSDESNFNSFSLTTLQLGQY
MRLDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMEKTKIEER
LDLVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHTATLQDCHRVYQAVSHIPALIT
ALESYSGSYKVLLHAVFTSPLADLQTDFIKYQEMIETTLDMNQIEHHEFLVKASFDPVLS
ELREKMDALEKSMQAVLSSAARELGLEAGKTVKLESNAVLGFYLRVTCKEEKSLRNNKKF
TTLDVQKNGVRFTNSKLSSLNEEYTRSREEYEEAQNAIVKEIINIASGYVDPLQTLSDVI
AQLDAVASFAVASVSAPVPYVRPRLLDDGRRRLELLQARHPCMETDADTAFIPNDISFVQ
GEKSFYIITGPNMGGKSTFIRQVGLIALMAQIGCFVPCEKAELSVIDSVLARVGAGDSQV
KGVSTFMSEMLETAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHISSKIGCFCL
FATHFHELTALAAQQPSVNNLHVTALTTHNMLTMLYRVKPGVCDQSFGIHVAELACFPPS
VLEVAREKAEELEEFQEPVGDDSKQDEEPEVKRRRTDKQVGENLIQDFLEKVKALPVATM
TEEEVKAELRRIKQDLVAKNNTYISEILARCAPVKTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccgaagcagaaccaaaacctgtccctggacagcgcggccgaacacggc
tttctgaacttcatattctctatgccggagaaaccggacacaaccttcaggatattcgac
cggaacgactactacaccgtccacgggaaggacgccatatttgctgccaaggaggttttt
aagactaacggagtcatcaaatatctgggctcagggagccgtaagctggagagcgtgatc
ctgagcaagctgaacttcgaggcctttgtgaaggatctgttgctggtgaagcagtaccga
gtggaggtatacaggaaccacagcaagagcagcaaggaacacgactggaggatcgagtac
aaggcctctccaggaaacctgacccagttcgaggacattctgttcggcggaggaaccgga
ggcgagggatgcgcgggagtggtcgccgtgcggtttgcgacgggagccgacgggcagcga
gtggtcggggtcggctatgtggacgcggcccagaggaccatgggggtgtgtgagtttccg
gacaacgagatcttctccaacctggagtctctgctcgtccagatcagccccaaagagtgt
ctgctgactcagggagaatgcagcgctgaggggaccaagctccgggaggtggtgcaacgt
ggcggtgttctggtctctgacaggaagagagcagagttcagcagcaaggacatcgtccag
gatctcaacaggctactgcgatccaagagaggagagacggtggcgagcaacacgctgcct
gaactggacaagcaggtggccatgtcatgtttggctgctgtggttcggttcctcgagctt
ctctccgacgagtccaacttcaactctttcagcctcactacgctgcagctgggtcagtac
atgaggctggacaacgccgccgtcagggctctcaacctcttccagggttcgcccgacgac
accagtggagctcattcattggccggtttgttgaacaagtgccgcactccgcagggtcag
cggctggtcaaccagtggatcaaacagccacttatggagaaaaccaaaatagaggaaaga
ctggaccttgtggagagtttcgtgtgcgactcggagctgaggcagacttgtcaggaggat
ctgctgcgacgctttccagatctccaccgcctggccaaaaagtttcaccgtcacacggcg
acgctgcaggactgccaccgcgtctaccaggccgtgagccacatccccgctctcatcacg
gctctggagagctactcgggcagctacaaggtgttgctgcacgcggtgttcacctcgcct
ctcgctgacctgcagacagatttcatcaagtaccaggagatgattgaaaccactctggac
atgaatcagatcgaacaccacgagttcctggtgaaggcgtcgttcgatcccgttctgagt
gagctcagggagaagatggacgccctggagaaaagcatgcaggctgtgctgagcagtgca
gccagagaactaggtctggaagccggtaagacggtgaagctggagtccaacgccgtgctg
ggcttctacctgcgggtcacgtgcaaggaggagaagagtttgaggaacaacaagaagttc
accacactggacgttcagaagaacggcgttcgcttcacaaacagcaagctgagctctctg
aacgaggagtacaccaggagcagggaggagtacgaggaggcccagaacgccatcgtcaaa
gagatcatcaacatcgcctcaggttatgtggatccccttcagacgctgagtgacgtcatc
gcgcagctcgacgcggtggccagcttcgctgtggcgtcggtgtccgctccggttccgtac
gtccggccacgactgctggacgacggccgcaggcgtctggagctgctgcaggccagacat
ccctgcatggagacggacgcggacaccgccttcatacccaacgacatcagcttcgtccag
ggggagaagagcttctatattataacaggaccaaacatgggagggaagtccacgtttatc
cgtcaggtgggtctgatcgcgctgatggctcagatcggctgtttcgtgccatgcgagaag
gcggagctcagcgtgatcgacagcgttctggcccgagtgggagcaggagacagccaggtg
aagggagtgtccaccttcatgtctgagatgttggaaaccgccgccatcctccgctctgcc
acggaaaactccctcatcatcatcgacgagctcggcaggggaacctctacgtacgacggc
ttcgggctggcctgggccatcagcgaacacatctcctccaaaatcggctgcttctgcctc
ttcgccacacacttccacgagctgaccgccttggcggcacagcagccgtccgtcaacaac
ctgcatgtcaccgccctgacgacccacaacatgcttacaatgctgtaccgagtcaaacca
ggtgtgtgtgaccagagttttgggatccacgtcgccgagctggcctgcttccccccgtcg
gtgctggaagtggcgagggagaaggcggaggagctggaagagttccaggaacctgtgggc
gacgattcgaagcaggatgaagagcccgaggtcaagagacggcggacagataagcaagtg
ggagaaaacctcatccaggacttcctggagaaggtgaaggcacttcctgtcgccaccatg
accgaggaggaggtgaaggcagagctcaggaggataaagcaagatttggtggccaaaaat
aacacgtacatcagtgagatacttgcccgctgtgctcctgtaaaaactgcctga
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