Poecilia formosa (Amazon molly): 103145419
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Entry
103145419 CDS
T07984
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03030
DNA replication
pfor03410
Base excision repair
pfor03420
Nucleotide excision repair
pfor03430
Mismatch repair
pfor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103145419 (pold1)
03410 Base excision repair
103145419 (pold1)
03420 Nucleotide excision repair
103145419 (pold1)
03430 Mismatch repair
103145419 (pold1)
03440 Homologous recombination
103145419 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfor03032
]
103145419 (pold1)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103145419 (pold1)
Enzymes [BR:
pfor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103145419 (pold1)
DNA replication proteins [BR:
pfor03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103145419 (pold1)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103145419 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
103145419 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
103145419
NCBI-ProteinID:
XP_007562915
Ensembl:
ENSPFOG00000007750
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPLMGGASQAKRGKATGDWEDSPSQFEEELSMFDDAEMDVEDMEGQAGHDVI
PVGDLFSADLNPRWRRPPAPSLDPSSDKLVFQQIDLDYYLGGSVAGMPGQSQGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPNGFTSNYLEEFKRELNSVVLKDMRSNKDNISITV
LAVDICRKESIYGYHGQRSLDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQSYQAYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRVREEKSSTDADSQTLGKVSLCQYEVDVGWTDFI
SHPAEGEWQKIAPLRVLSFDIECAGRKGIFPEPDRDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
YFPYLGRMRGIKSVLRELSFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSV
PIATLDFSSLYPSIMMAHNLCYTTLLQKGAAEKLGLSPDDFIKTPTGDQFVKSSVRKGLL
PEILENLLSARKRAKTELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEKTKQLVESKYTISNGYQADARVVYGDTDSVMVKLGVTTVKEAMEIGR
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSPDTHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIERDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGETKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCK
AVLKTDAAVCDFCKKKESELYQKEIFHLNALEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaagcgacgcaacggtggccctctcatgggtggtgcatcccaggccaagcga
ggtaaagcgactggtgactgggaggacagtccatcccagtttgaggaagaattgtcaatg
tttgatgacgcagagatggatgtggaagacatggagggacaggccggacatgatgtcatt
cccgtgggcgaccttttctcagcagacctaaaccctcgttggagaaggcctcctgcccct
tcactggatccatcttcagataaattggtgttccagcagattgatctcgactattacctg
ggtggctctgtagccgggatgcctggtcagtcacaaggaaaagttcccatcattaggatg
tttggtgtaacagatagtgggaacagtgtgtgctgtcatgttcatggctttgcgccttac
ttctatgttcctgcaccaaatgggttcacatctaattacctggaggaatttaaaagagag
ctgaactctgttgttcttaaggacatgcgctccaataaggacaacatctccatcacagtg
cttgctgtggacatctgccgtaaagagagcatatatggttaccacggacaacgcagcctt
gatttcttgcggataacgatggcgatgcctcgtctcatcgcacctgcaaagcggctgctg
gaacagggcttcaagtttggaccttttcccatccagagctaccaggcttatgaggccaac
atagattttgaaatcaggttcatggtggacagtgatgtggtgggatgctgctggattgaa
cttcccaaaggcaagtacagagtgcgtgaagagaagagctcaacggacgcagattctcag
actctaggaaaggtttctttgtgccagtatgaggttgatgtcggatggacagacttcata
agtcaccctgcagaaggagagtggcagaagatcgctccgcttagggtgcttagctttgac
atagagtgtgcaggaagaaaaggaatctttccagaaccagatagagatccagtgattcag
atagcctctatggtccaaaggcagggtgaaactgagccgttcattcgcacagttttcacc
ctccagtcctgcgctagcatcgttggctctcagatactatgcttcactcaggagaaacag
ctccttcagagctgggcggagttcttgaggactgtagacccagacatcataactggatac
aatatccagaactttgactttccctacttgctcaacagagcggctgctttgaaggtgaat
tattttccatatttgggtcggatgcggggcatcaaatcagttctgcgagagttgagcttc
cagagtaagcagatggggcgcagggagaacaagaccatcaacatggagggtcgagttcag
tttgatctgctgcaggttcttctaagggattacaaattacgctcctacactctgaacgct
gtgagtttccatttcctacaagaacagaaggaggatgtgcaacattcaatcattaccgat
ctgcagaatggaaacgaacaaacacggcgccgtttagcggtctactgcctgaaggacgcc
tacctcccgctgcgcctgctgcagaaactgatgtgtgtgatcaactacatggagatggcc
agagtgacaggagtgcctctcacttacctcctctccagaggacagcagatcaaagtcgtc
tctcagctgctgcggcaggctatgaaacaggatctggtaatgcctgttgtgaaaaccgag
gggggcgaagactacacaggagcaacggtcattgagccagagaaaggctattacagcgtt
cctattgccaccctggacttttcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccaccttgctgcagaaaggcgctgctgagaaactgggattgtcaccagatgac
ttcatcaagactcccacaggtgatcagtttgtgaagagctctgtgagaaaaggtcttctt
ccagagatcctggagaacctgctgtctgcccgaaagagggccaaaacggaactaaagaag
gaaacggatcctttcaagaagcaggtgctggacggccgacagctagccctgaaaatcagt
gccaactctgtgtacggcttcaccggggcccaggtgggcaaactgccctgcttggagatc
tcacagagtgtaactggttttggaagacagatgattgagaaaaccaagcagctggtggag
tccaaatacacaatctccaacggataccaagctgacgccagggtggtttatggagacaca
gactctgtcatggtcaaactcggagttacaaccgtaaaagaagccatggaaatcgggagg
gaagcagctgagtgggtgtcgtcgcatttcactccacccatcaagctggagtttgagaag
gtgtattacccatacctgctgatcaataagaagcgctatgcaggcctgtacttctcctcc
agtccagacacgcatgacaagatggactgcaaaggcattgagacggtccgcagagacaac
tgccctctagtggccaatcttattaacacttgtctacaaaagatcctcattgagagggat
cctcagggtgcggtggatcatgcgaaagaagtgatctcagacctgctgtgcaatcgcatt
gacatcagtcagctggtcatcactaaggagctgacgcgcacagcccaggagtacgctggc
aagcaggcacacgtggagctggccgaaaggatgaggaaaagggatgcaggcagcgcccca
aacctgggagacagagtcccctacgtcatcatcaaggctgcaaagggagcagctgcttac
atgaagtcagaggacccaatctacgttctggagaacaatattcccatcgacacacagtac
tacctggagcagcagctgtccaagccgctgctgaggatattcgagcccatcctgggggag
accaaggcggagagcgtcctgctaaagggcgaccacacgcgctgcaagactgtgttgacc
tcaaaggtcggaggcctcatggcgttcgctcagaagagaagcacctgcatcggctgcaaa
gccgtgctcaagactgatgctgctgtgtgtgatttctgcaaaaagaaagagtcggaactt
tatcaaaaagagatcttccacctgaatgcgttggaggagcgtttctcccgtctgtggact
cagtgccagcgctgccagggttcgctccacgaagatgtgctctgcaccagtcgtgattgt
ccgatcttctacatgaggaagaaggttcagaaagatctggatgaccagagcaagcttgtg
tctcgattcggatggtga
DBGET
integrated database retrieval system
