Poecilia formosa (Amazon molly): 103145796
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Entry
103145796 CDS
T07984
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103145796 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103145796 (rae1)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103145796 (rae1)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103145796 (rae1)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103145796 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_HPS5
ExoI_SH3
Beta-prop_WDR41
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103145796
NCBI-ProteinID:
XP_016532566
Ensembl:
ENSPFOG00000005141
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGNASSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLGVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcggaaatgcttccagctttggaacaggagggactggtgtttttggaagc
acgacaactgacagccataatcccatgaaggatgtcgaagtgacttcgcctccagatgac
agcatcagctgcctggccttcagtcctccaaccatgccaggaaacttccttattgcagga
tcctgggctaacgatgttagatgttgggaggtgcaggacaacggacagaccgtccccaaa
gcccaacagatgcacacgggtccggtgctgggtgtctgctggagtgacgacggcagtaag
gtgttcaccgcttcatgcgacaagacggccaagatgtgggatcttaacagcaaccaagca
atgcagattgcacagcatgacggtccaatcaaatcaatccactggataaaagccccaaac
tacagctgtatcatgactggcagctgggataaaacactgaagttttgggacacccgctcg
cccaaccccatgatgtccctgcagatgcccgagagatgctactgtgccgacgttgtgtat
cccatggcagtggtagccacagcggaaagaggccttatagtgtaccagttagagaaccag
ccttctgagtttcgcagaatagactcccctctcaaacatcagcaccgttgtgttgccata
tttaaggacaagcagaacaagccaacaggctttgcactgggaagcatcgagggcagagtg
gccatccattacatcaatccgccaaacccagccaaagataatttcaccttcaagtgccat
aggtccaatggaaccaacacaaccactccacaggacatctatgctgttaacgccatctcc
ttccatcctgtccatggcacgctggccaccgtgggctccgacggacgcttcagcttctgg
gacaaagacgcgcgcaccaagctgaagacctccgagcagctcgaccagccaatcacagct
tgctgcttcaaccacaacggcaacatcttcgcgtacgcctcgagctacgactggtcaaag
ggccatgaatactacaacccccagaaaaagaactacatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system