Poecilia formosa (Amazon molly): 103146042
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Entry
103146042 CDS
T07984
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03082
ATP-dependent chromatin remodeling
pfor03083
Polycomb repressive complex
pfor04110
Cell cycle
pfor04330
Notch signaling pathway
pfor04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103146042
03083 Polycomb repressive complex
103146042
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103146042
04350 TGF-beta signaling pathway
103146042
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103146042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfor03036
]
103146042
Enzymes [BR:
pfor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103146042
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103146042
HDAC complexes
Sin3A-HDAC complex
103146042
BRAF-HDAC complex
103146042
REST complex
103146042
SHIP complex
103146042
MiDAC complex
103146042
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103146042
Heterochromatin formation proteins
Other heterochromatin formation proteins
103146042
Chromatin remodeling factors
NuRD complex
103146042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Glypican
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
103146042
NCBI-ProteinID:
XP_007563814
Ensembl:
ENSPFOG00000005786
UniProt:
A0A087XJ17
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKSFNLPLLMLGG
GGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHPDSGDEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEIK
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattattatgacggtgacgtgggg
aactattactacggccaaggtcatcccatgaagccccacaggatccgcatgacgcacaac
ctcctcctcaactacggactctacaggaaaatggagatctataggccacacaaagccagc
gctgaagagatgaccaagtaccacagtgacgactacatcaagttcctgaggtccatccgt
ccagacaacatgtctgagtacagcaaacagatgcagagatttaatgtcggagaggactgt
ccagtttttgacggtctgtttgagttttgccagctctcgacaggtggctcagtcgctgga
gcagtgaagctgaacaagcagcagacggacatcgccatcaactgggctggaggactccac
cacgccaagaagtctgaggcgtccggcttctgctacgtcaacgacatcgtcctcgccatc
ctggagctgctgaaataccaccagagggtgctctacatagacatcgacatccaccatggc
gacggcgttgaggaggccttctataccacagacagggtcatgaccgtttccttccacaaa
tacggggaatacttccccggcactggagatctgagggacatcggagcaggaaaaggcaag
tactacgccgtaaactaccctctaagagacggcatcgacgatgagtcttatgaagccatc
ttcaaacctattatggctaaagtcatggagatgtaccagcccagtgctgtggttctgcag
tgtggagcagattctctttctggagaccgactgggctgcttcaacctcaccatcaaaggc
catgccaagtgcgtggagtacatcaaaagcttcaacctacctctgctgatgctgggcgga
ggcggctacaccatccgcaacgtcgcccgctgctggaccttcgagacggccgtggccctg
gactcgtccatccccaacgagttgccctacaacgattactttgaatactttgggcccgac
ttcaagctgcacatcagcccgtccaacatgaccaaccagaacaccaacgagtatctggag
aagatcaagcagcgtctctttgagaacctccgcatgctgcctcacgcccccggagtccag
atgcaggccatccccgaggacgccccgcaccccgacagcggagacgaggacgaggaggac
cctgacaaacgcgtctccatccgggcccacgacaagaggatagcctgtgaggaagagttc
tcagactctgaggacgaggctgaggggcaaggtggcggccgcaggaacgcagccaatcac
aaaaaggcaaagagagtgaagaaggaggaagagaaggaaggagaggaaaagaaagaagtc
aaagaggaagagaaagaggaggagaagatggacacatctggaccaaaagaggagataaag
acaacttga
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integrated database retrieval system