Poecilia formosa (Amazon molly): 103146118
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Entry
103146118 CDS
T07984
Symbol
lig3
Name
(RefSeq) DNA ligase 3 isoform X3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103146118 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103146118 (lig3)
Enzymes [BR:
pfor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103146118 (lig3)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103146118 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
103146118
NCBI-ProteinID:
XP_007563936
Ensembl:
ENSPFOG00000002118
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MQRHLIFLVQKTVCVGRQPFGTLIRCKQPSTFCRTFLISSTSDQRKSLASHKHHLQKRHA
PWTSICRCFSEWPDMSEQRFLVEYAKRGTAGCKKCKDKIQKGIVRIGKIVPNPFSESAGE
MKEWYHVKCIFEKLERARATTKKIEDLTELEGWEELQDEDKELINKHVSDLMAKVNASPK
KKVQAKLNTTGQLMAPPADPSVNAPRKFSGFTAAKAGSSGSSSSPGLSASPAAKAGSSSA
LSTQLCDAQHKDCLFREFRKLCAMVAENNSYNSKTQIIEKFLKKGTGGDKFHGDLYLTVK
LLLPGVVKSVYNLNDKQIVKLFSRIFRSNQEDMVRDLEQGDVSETVRIFFEESKSFPPAA
KSLLTIQEVDASLMRLAQLTKEDEQQSELENIAKKCTSNDLKCIIRLIKHDLKMNAGAKH
VLDAVDPNAYDAFKASRNLGDVIERVLRNQQDASSGSGPRKLLTIEASLMTPVQPMLAEA
CKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGNTFSYFSRSLKPVLPHKVAHFKEYIPQA
FPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNGVSLMER
PLCERRKFLDDNMVEVPNRILFSEMKHVTRAGDLAEMITRVIREGLEGLVLKDVKGSYEP
GKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDSKKWCTVTK
CSGGYDDAMLARLQKELDVIKISKEPGKIPSWLKIVKNYYPDFIIRDPEQAPVWEITGAE
FSKSEMHTADGISIRFPRMTRIRDDKDWKTATNLHQLRELFRISKENCDFKVTAGPSTSD
DKGSSGGDSGGNSPSSSSSRSTPAKKTSNSTPTKPKAVKSKPRTPTSQASSVKKVKKSEE
SVQSNGQNKTSSQLLQPRNDKTLLDIFSGVKLFLPDSVQDFDRLRRYFVAYDGDLVPDYD
SASATHTLGDPEGGSRAQRVSPSWIWECIRKRRVVPPC
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcagagacatctaattttcttggttcagaagactgtctgtgtgggccgacaacctttt
ggtacactaatccgatgtaaacaaccttcaacgttttgcagaacatttctaatttcatct
acctctgatcagcgaaaatccttagcttcccataaacaccatcttcaaaaaagacacgct
ccctggacttcgatttgccggtgcttttctgagtggccagatatgtcggaacaacgcttc
cttgtggaatatgccaaacgtggcacggcggggtgcaagaaatgcaaggacaaaatccag
aagggcatcgtgcgcatagggaaaatcgtgccaaaccctttcagcgagtctgctggcgaa
atgaaggagtggtatcacgtgaagtgcatatttgagaagctggagagggccagagccacg
acgaagaagatcgaggacctgacggagctggagggctgggaggagctgcaggacgaggac
aaagagctcattaataaacatgtttcagacctgatggccaaagtcaatgctagtcctaaa
aagaaggtccaggccaagttgaacaccactggtcagctcatggcgccccctgctgaccct
tctgtcaatgctccgaggaagttttctggcttcacagctgcgaaggctggcagctccggt
agctccagcagccccggactgtcggcgtccccggcggccaaagccggctccagcagcgcc
ctgtccactcagctctgtgatgcccagcacaaagactgcctcttcagggagtttcgcaaa
ctctgcgcaatggtggctgaaaacaacagctacaacagcaagacacagattatagagaag
ttcctgaagaagggcacaggaggagataaattccacggagatctttacctgacggtgaaa
ctgctgctgccaggcgtggtgaaaagtgtttacaacctgaacgataagcagatagtaaaa
ctcttcagccgcatattcagatccaaccaggaggacatggtgcgagatctggagcagggc
gacgtgtcagaaactgtgaggattttcttcgaggagagcaaatcttttcctcctgctgcc
aagagcctcctaacaatccaggaagtagatgcgtccctgatgcgccttgctcagctcacg
aaggaggacgagcagcagagcgagctggagaacatcgccaaaaaatgcaccagcaatgac
ctgaaatgcatcatcaggctaattaagcacgacttgaagatgaacgccggcgccaaacac
gtgttggacgcggtagatccaaacgcgtatgatgccttcaaggcctcccgtaaccttggc
gacgtgatcgagagggttctgaggaaccagcaggacgcctccagcggctctggacccagg
aagctcctgaccatagaggcgtcgctcatgactcccgtccagccgatgctggccgaggcg
tgtaaatccatcgagtacgccatgaagaaatgtcccaacgggatgtactccgagataaaa
tacgacggcgagcgcgttcaggtccacaagaatggaaacaccttcagctacttcagccgc
agcctcaagccggtgctgccccacaaggtggcccacttcaaagagtacatcccccaggct
ttccctggtggtcacagcatgattctggacgctgaagtcctgctgattgacacaaagacc
agcaaaccgctgccgtttggcactctgggtgttcacaagaaagctgcctttcaagacgcc
aacgtgtgtctgtttgtgtttgactgcatttacttcaacggtgtgagtttgatggaaagg
ccgctctgcgaacgcaggaagttcctggacgacaacatggtggaagtcccaaacaggatc
ctcttctcagagatgaagcacgtcacgagggcaggagacctggcggagatgataactcgc
gtcatcagagaaggactggaaggcctggtgctgaaagacgtaaagggaagctatgagccg
gggaagcgacactggctgaaggtgaagaaggattatttgaacgagggagccatggccgac
accgcagacctggtggtgctcggtgctttctatggaaaaggatcaaacgggggcatcatg
tctagctttctgatgggctgctatgacccggactcgaagaagtggtgcacggtgaccaag
tgctccggaggctacgatgacgccatgctggcccgactccagaaggagctggacgtgatc
aaaatcagcaaggaacccgggaaaatccccagctggttgaaaattgtcaagaactattat
cctgatttcattattcgtgaccctgagcaagctccggtctgggagatcactggcgcagag
ttctccaaatcagaaatgcacaccgctgatggcatctccatccgcttcccccgcatgacg
cgaatccgcgacgataaggattggaagacggccaccaacctgcaccagctcagggagctg
tttcgcatttccaaggagaactgcgactttaaagtgacggcgggtccttccacgtccgat
gacaaaggctcatcgggaggagacagcgggggaaactcaccgtcgtcctcatccagcagg
agcactccggccaaaaagacgagcaacagcacccctaccaaaccaaaggctgtaaaatca
aaacctcgcactcccacctctcaggcctccagtgtcaagaaggtgaagaagagcgaggag
agcgttcagagcaacggacaaaacaaaacgtcttcccagctgctgcagccgaggaacgac
aagacgctgctggacatcttcagcggggtcaagctcttcctccccgactccgttcaggac
ttcgacaggctgcggcggtactttgtggcgtacgacggagacctggtgccggattacgac
tccgcctcggctacacacacgctgggcgacccggaggggggcagccgggcccagagggtt
tctcccagctggatctgggaatgcatccgaaagcggcgcgtcgttcctccctgctga
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