Poecilia formosa (Amazon molly): 103146503
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Entry
103146503 CDS
T07984
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X3
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03015
mRNA surveillance pathway
pfor03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103146503 (cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103146503 (cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103146503 (cpsf6)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
103146503 (cpsf6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103146503
NCBI-ProteinID:
XP_007564515
Ensembl:
ENSPFOG00000006990
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MADGVDHIDIYADVEEEFSQEPEYPPHEQIDLYDDVISPSANNGDAPEDRDYLDSLPAPG
GSEGGKSAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAIRSIGISDVLEIKFFENRAN
GQSKGFALVCVGSEASSRKLMDLLSKRELHGQNPIVTPCNKQSLSQFEMQSRKSTQSGQM
SGEGKAGPPGSGSRGGFPMGSRSKGRFPGPPGPGNDRFPGPVGPGGPPPHFPGGVGPPRP
PPGPPGPPGPPGPPPPGQGLPPPLPGPPNRGDRPPPPVLFPTQFGQPPLGPLPPGPPPAG
YVPPPGPPPPHQGPPPPGPFPPRPPGPIGPPLALAPPPHLPGPPPGGPPPAPHVNPAFFP
PPGGNNMPPNDSRGPPGPNDLYGRPPPYDSRDYGPGRGDMESSRGPLNEAEFEEIMNRNR
AISSSAISRAVSDASAADYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIES
KSYGSVSRRERSRERDHSRSREKSRRHKSRSRDRHEDYYRERSRERDRHRERDRDRDRER
EREREYRHR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccatatcgacatctacgccgacgtcgaggaggaatttagccag
gaaccggagtaccctcctcatgagcagatcgacttgtacgatgatgtaatatccccgtca
gccaataacggagatgctccggaagaccgcgactacctggactcgctccccgccccgggg
ggctccgaaggggggaagagcgccccgcccaatgtggtttacacctacacaggcaaaagg
attgccctgtacataggaaacctcacatggtggacgacagacgaagacctgacagaagct
attcggtcaataggcatctcagatgtgcttgagatcaagttctttgaaaaccgagccaat
ggccagtctaaagggtttgccctcgtgtgcgtcggttccgaggcatcgtccagaaagtta
atggacctgttgtccaagagggagctccatggacagaatcccatcgtcacgccgtgcaac
aaacaatctctgagtcagtttgagatgcagtcgcgtaaaagtacccagtcgggccaaatg
tctggggaaggcaaagccgggcctccaggctccggctcccgtggcggattcccgatgggc
agccgcagcaaaggcaggttccctggaccccctggtcctggaaatgaccgtttccccggc
cccgtggggcccggaggcccgccgccacacttcccaggtggtgtgggacctcctcgtcct
cctccgggcccccctgggcctccagggcctccaggtcctccacctcccggccaaggcctt
cctcctcctctgccaggccccccgaatcgtggcgaccggcctcccccacctgttctcttc
cctactcagttcggtcagccaccgctcggacctctccctccaggccccccacctgcaggt
tacgtcccccctcctggtcctccaccgcctcatcagggcccgcctcccccaggacccttt
cctcctcggcctccaggccctattggacccccgttggctttggctccacccccacacttg
ccaggccctcctccaggtggaccaccaccagctcctcatgtgaaccccgccttcttccct
ccgcctggagggaacaacatgccccccaacgacagccgagggcccccggggccaaacgac
ctgtacggccggccgccgccatacgattccagagattacggtcctggacgaggagacatg
gagtcatcacggggccccctgaatgaggccgagtttgaggagatcatgaacaggaacaga
gccatctcctccagcgccatttccagggccgtgtctgatgccagcgcagctgattatggc
agtgctatagagactttggtgacggccatcagtctgatcaagcagtccaaagtttctgca
gacgaccgctgcaaagtcctcatcagttccctgcaagactgtctccacggcatagagtcg
aagagctacggctctgtatctagaagagaacgctccagagaacgcgaccatagccgctcc
agagaaaagagccggcgacacaaatcccgcagtcgagaccggcacgaggattattaccga
gagcgcagccgggagcgcgaccgccaccgcgagagggaccgggacagagaccgtgaacga
gagcgggagagggagtaccggcaccgctag
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