Poecilia formosa (Amazon molly): 103147269
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Entry
103147269 CDS
T07984
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103147269 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103147269 (cpsf3)
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103147269 (cpsf3)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103147269 (cpsf3)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103147269 (cpsf3)
U7-dependent histone pre-mRNA processing factors
103147269 (cpsf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103147269
NCBI-ProteinID:
XP_007565587
Ensembl:
ENSPFOG00000010418
UniProt:
A0A087XXP2
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MASKRKADMVIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEDSMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSSQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCAQGQRVSGILVKKNFNYHILNPSDLSTYTELAMSTVKQNQAIPFTGPYSLLVCHLRNL
TGDVEELDGTEKKTLKIFKSITLVHEVGMVVLEWVANPLNDMFADAVTTVVLEVQSNPKA
QKVMETQTTTMDMDVFQTRLEVMLQDMFGEDCVDFSDGKVISVTVDGQTVHISLETRSVY
CEDDVSEDDSLREMVELAVQRLYDALNPAL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaagcgaaaagcagacatggtgatccctgctgaggaaagcgaccagctcctc
atccgtcctcttggcgctgggcaggaggttgggagatcttgtataatcctggagttcaaa
gggaggaaaattatgctggactgcggcatccatccgggtttggagggaatggatgctctt
ccctatatcgacctgatcgaccccgcggagatcgacctcctcctcatcagccattttcac
ttggatcactgcggggctctgccctggttcctccagaaaaccagctttaaggggcggaca
ttcatgacgcacgccaccaaggccatctaccgctggctgctgtcagactacgtcaaagtc
agtaatatctctgcagatgacatgctgtacactgagaccgacctggaggacagcatggat
aaaatcgagaccatcaacttccatgaggtgaaggaagtggctgggatcaagttctggtgc
taccatgctggtcatgtgctgggagcggccatgttcatgatcgaaatagctggagttaaa
ctgctgtacacaggcgacttctccagacaggaagacagacacctgatggcagcggagatc
ccgagcgtcaaacctgacatcttaatcatagagtcgacctacgggactcacatccatgag
aagagggaggagcgcgaggctcgcttctgcaacacggtgcacgacatcgtcaaccgggag
ggccgctgcttgattcctgtgttcgccttgggacgggcccaggagctgctgctcatcctg
gatgaatactggcagaatcacccagaactccacgacattcccatctattacgcctcatct
ctggccaagaagtgcatggctgtctaccagacctacgtcaatgcaatgaacgacaaaatc
cgcaaagcaatcaacatcaacaacccctttgtgttcaaacacatcagcaatttgaagagc
atggaccactttgacgacatcggccccagcgtggtgatggcgtcgccgggtatgatgcag
agcggcctctccagggagctgttcgagagctggtgcaccgataagaggaacggcgtcatc
atcgctgggtactgtgtggagggaactctagctaagcacatcatgtctgagccggaggag
atcaccaccatgtccagtcagaagctgccgctcaagatgtcggtggactacatctccttc
tccgcccacaccgactaccagcagaccagcgagttcatccgggccctcaagccgcctcat
gtgattctggttcacggggagcagaacgagatggcccgcctgaaggcagcgctgatccgg
gagtacgaggacaacgaccaggtccacatcgaggtgcacaaccctcgcaacacggaggcc
gtcactctcaacttcaggggagagaagctggccaaggtgatgggttccctggctgataag
aaatgtgctcagggtcagagggtgtccggcatactcgtcaagaagaacttcaattaccac
atcctgaacccgtccgacctctcgacgtacacagagctggccatgagcacggtgaagcag
aaccaggccatcccgttcaccgggccgtactcgctgctcgtctgccacctgaggaacctg
acaggggacgtggaggagctggacggcaccgagaagaaaacgctgaagatctttaaaagc
atcactctggtccacgaggtcggcatggtggtgctggagtgggtagccaatccgctgaac
gacatgtttgctgatgccgtcaccactgtggtgctggaggtgcagtccaacccaaaggct
cagaaagtcatggagacgcagaccaccaccatggacatggatgtcttccagacccggtta
gaggtcatgctgcaggacatgtttggagaggactgtgtggacttcagcgatgggaaagtc
atttctgtgacggtggacggacagacggtccacatcagcttggagacgcggtcggtttac
tgcgaggacgacgtctcggaggacgactccctcagagagatggtggagctggccgtgcag
cggctctacgacgccctgaacccggccctctga
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integrated database retrieval system
