Poecilia formosa (Amazon molly): 103147652
Help
Entry
103147652 CDS
T07984
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103147652 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103147652 (smarcc2)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103147652 (smarcc2)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103147652 (smarcc2)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103147652 (smarcc2)
PBAF complex
103147652 (smarcc2)
GBAF(ncBAF) complex
103147652 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
103147652
NCBI-ProteinID:
XP_016534142
Ensembl:
ENSPFOG00000010441
UniProt:
A0A087XY41
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKTSSSHIVVP
IPSSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAALEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGDGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEELSKDLDEASPVPASEEGNTAKTN
NTKKDSESTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQPMISFPDKVKEKPTDLQNFGLRTDMYSKKTGSAKSKSGVSSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSTLGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPDESSDESKSDSQSSEEKRDAKESKDGAMEEEEK
QVENGKKEEERGREAEGEREADKTEPEMGDGEKEKDAKEGTEEGQREGEMEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHSNQAA
SAAPPQGPSASQPAPSTPAPQAAPSPAPPASSAPAPESQPAAGTHTSSPCPPGQPPAPHS
SSSTTPIHHEPSAPHQGESLHPSAPVPAPQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatattttgaagcgtctgacacc
gtttcccagtttgataatgtccgagtctggctgggaaagaattataaaaagtacatccag
gctgagccccccactaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggttttcggcagacatgtcagcaatcctcccctcacaaagctgccgatgaaatgt
ttcctagacttcaagtccggcggggctctgtgccacattctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgaccatagagaagtccttagtgcagaacaactgtctcactcgaccc
gtcatctacctgagctctgacatagaaccaaagctgctcggaaaactgaaagacatcatc
aaaagacaccagggctccgtgactgaggacaaaacctccagctcccatattgtggtgcct
attccttccagtctggaggaagaggagtgggtgcgtcctgtgatgaagagagacaagcag
gttctgctccactggggatattttccagacagctatgacacctggatcccggccagtgag
atcgaggctgcgttggaggatcctcctagcccagaaaagcccagaaaggttcacgcaaag
tggattttagacctcgaccagtacaacgagtggatgaacgaggaagactatgaggtggga
gacggctgtccaaagaggaagaggatctctgccaagacgctgaccgatgaggtgacgaca
ccagatgagcgaagggacaagaaacccggcagtgccaagaaaagaaagcgatcgccatca
ccttcaccaacccctccgcctcaagagagcaagaaaaaaaacaccaaaaaagggccaacg
accccgtacaccaagtctaaacgaggtcagagggaggaggaacaggaggagctgtccaag
gatctggatgaagcctcacctgttcctgcatctgaagagggaaacacagcaaagacaaac
aacaccaagaaggactctgaatcgaccccagtgaagggaggcactgacatggacgaacaa
gaagacgagtcaatggagacaacaggaaaggaagaggaggagggcagccccagtgtgaag
ggcgaaccggtgaagagctcagaccttcacgaggacaacgtgacggagcaaactcaccac
atcatcatccccagctacgccgcctggttcgactacaacagtgttcatgccattgagcgg
cgagccctgcccgagtttttcaacgggaagaacaaatctaaaacccccgagatttatcta
gcatacaggaacttcatgattgacacctatcgactgaaccctcaggagtacctgacctcc
accgcctgccgcagaaacctggcaggagacgtgtgtgccatcatgagagttcatgctttt
ctggagcagtggggactgatcaactatcaggtggactcagagagtcggcccacgcccatg
ggacccccgccgacctctcacttccacgtcctggcggacactccttcgagtctggtgccc
ctgcagcccaaaacatcccagacccccgccacccagccgatgatatcattcccagacaag
gtgaaggagaagcccacagatctgcaaaactttgggctgcggaccgacatgtacagcaag
aagactggatctgctaagagcaagagtggagtgagctctatgagggagtggacagagcag
gaaacactactactacttgaggggctggagatgtataaggacgactggaacaaggtctct
gaacacgtgggcagccgtacacaagacgagtgcatcctgcacttcctgcggttgccgatc
gaagacccgtacttggaggacagctcgtctactctgggcccactggcctaccagcccgtt
cccttcagccaagcaggaaaccccgtcatgagcactgtggccttcctggcttctgtagtt
gacccacgcgtggcctcagctgcagccaaatccgctctcgaggagttttcccggatgaaa
gaggaggttcctgcagcgcttgtcgaggctcacgtacggcgggtggaggaagcggcgaga
gtgagcggccgacaggatcccctgtatggcctggagggaagcggcatcgcagggaccggc
ctggaggagggagacagacccgatgaaagcagcgacgaaagcaagagtgacagccagtcg
agtgaggagaaaagagatgctaaggagagcaaagatggagcgatggaggaggaagagaag
caggtggagaatgggaagaaagaagaagaaagaggaagagaagccgaaggcgagagagag
gcagataaaacagagcctgagatgggtgatggtgagaaggagaaggatgctaaggaggga
acagaggagggacaaagagaaggagagatggaaggagagaggaaggctaaagtcgagcgc
gatgtgggagagggaaacctggcaactgctgccgcctccgcgttagcagctgctgccgtc
aaagccaagcatttagctgcagtggaagagaggaagatcaaatcgttggtggctctgctg
gtggagacccagatgaagaagcttgagattaaactgcgacactttgaagaactggaaact
atcatggacagagagcgggaggctctggagtaccagcggcagcagctgctggctgaccgc
cagtccttccacatggagcagctgaagtacgctgagatgagggcccgccagcagcacttc
cagcagatccagcaccagcagcacagccaggccggaggccctcactccaaccaggcggcc
tcggctgcaccgcctcaaggccccagtgccagtcagccagctcccagcacaccagctcca
caggcggcccccagtcctgccccaccagcttcttctgccccggcccccgagtcccaacct
gcagcaggcactcacacgtcatctccctgccccccaggccagcccccggcccctcactcc
agctccagcactacacccatacaccacgagcccagcgctcctcaccaaggtgagtcactc
cacccgtcagctcctgttcctgcaccacagtga
DBGET
integrated database retrieval system
