Poecilia formosa (Amazon molly): 103148284
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Entry
103148284 CDS
T07984
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103148284
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103148284
09142 Cell motility
04820 Cytoskeleton in muscle cells
103148284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfor04147
]
103148284
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103148284
Exosome [BR:
pfor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103148284
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103148284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103148284
NCBI-ProteinID:
XP_007567035
Ensembl:
ENSPFOG00000001288
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MAFKVTFMMFFTSWWFIFLVIHVQLLKAGKIEGPCQGRDCSQCVCHPAKGARGPPGKPGR
QGIQGPMGQRGRIGPQGEKGTVGAAGSHGLQGPKGDRGLTGVPGFTGHEGFPGHPGAGGE
PGLPGLDGCNGTRGHPGPDGLPGLDGLHGPPGPKGAKGSKGTPNYTGALPGPPGDKGRDG
DHGQTGSPGNIGPKGLRGLHGLRGPQGVEGPKGVKGSPGDPGKSPRGEIGEQGPPGLPGP
PGPEEQKGYPSEQFFQKGEKGNKGQHGPCGLKGRRGVGGDIYSPSQTGPKGEQGILGFPG
DRGSPGQSGGVGLTGQEGVPGDKGLPGLIGRKGEKGWPGDPGPPGFPQFHNGSTVRGPKG
DRGYPGAPGFPGETGYMGVPGPPGPPGLPEAHGRPGQPGDPGEKGQKGEPGTYDPNEILF
IQGPKGVKGHQGERGRDGCPGPQGCGNYYCEPGSLGEPGEDGPRGFSGNKGLKGVKGCPG
ECKCVHALGAVGPPGPPGYPGSPGFPGAPGPQGEPGLRGNDGPRGPDGAPGFTGLKGRKG
EKGDTYVRGTKGAKGDKGEPGYAGPPGGTGESGKDGFPGPVGEPGPPSPGYMGRPGPKGY
PGPPGPKGFPGPHGPPGPGFPGLKGEPGLQGNQGLPGLPGIPGRLGPPGETEPCCHEGQI
GPPGPKGEPGLPGVQGQPGRDGYPGNPGHQGPKGIKGDDGETLIGPPGSIGTNGDPGDPG
PAGISLDGPEGLPGLPGPHGRKGDPGHILSAWPGLVGPPGPRGAVGSYGIPGIPGYPGSP
GLQGPPGPQGRKGDPGDSGDLGDTGVPGPPCTVCELVGPPGPPGPSGRRGEQGVPGLPGQ
KGVKGDVGAPGRGQKGLKGNPGIPGAPGPAGSAGVVGPQGDPGIHGFPGQKGEKGLPGKP
GSRSMPGNPGPPGQPGEKGERGFPGRYGTTGDPGFPGNKGSPGPTGLPGLCSLVNLTKGP
SGFSGRRGPPGQTGFAGYKGSTGTPGDLGPDGWPGSQGLKGFAGIPGREGLSGLRGLHGI
KGFPGPRGYSGNTGDQGDPGPPGQIGIPGLPGFPGAKGNKGQSYGRPGPQGLKGLPGEIG
PSPHRGSPGHPGDPGPRGRQGQPGHPGATGETGRQGGPGSPGSRGLPGRQGIRGPPGDEG
IVGPPGPPGPWGNPGPPGTPGLDGLNGLRGPKGMKGADDQGTSGPRGQKGIPGAKGARGI
SGPAGATIPGVKGQTGAPGNTGFPGIPGTPGSSGKTCQNPLHGPQGDRGYEGLPGPSGPP
GPPGPPGGSISYKGDLGPDGHRGPPGHRGNKGVPGPPGPRGQSGSPGPKGEKGPDGPRGP
LGSRGQQGISGPQGCKGEIGPIGDPGVKGQPGDLITVDLRVPPPGAPGPKGVSGSEGSQG
YVGRPGPFGRTGQKGPKGFVGFPGTPGPPGLDGSSGDPGDVGERGYTGPQGAPGPPGDPG
EPGHRRQLRSGFLLVIHSQSVLVPQCPAGSNQLWVGYSLVYLEGQEKAHTQDLGQPGSCL
PVFSTMPFSYCDKDACYYSSRNDKSYWLSTTAPIPMMPLLGQEISLHISRCVVCETFSPA
VPFHSQDQAIPPCPDGWKSLWTGYSFLLHTGAGDEGGGQSLASSGSCLRDFRTHPFIECQ
GAQGSCHYFSNLYSFWLTTVRDREDFVPVKPGTIKAADQQRHKASRCNLCLRD
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaagtaactttcatgatgttttttacctcctggtggttcattttcctggtc
atccatgtgcagctgctgaaagcaggtaaaattgaaggcccgtgtcaaggcagagactgc
tctcagtgtgtgtgtcatcctgctaaaggtgcaaggggacctccagggaaaccagggagg
caaggtattcaaggtccaatgggacaacgaggacgaattgggcctcaaggggagaaggga
acagtgggcgcagcaggatcacatggcctacaggggccaaaaggagaccgtggtttgact
ggtgttcctggtttcacgggtcatgaaggatttccaggccaccctggagcagggggtgag
cctggtttaccaggactggatggctgtaatggaacaagaggtcatccaggaccggatggt
ctgcctggactggatggcctccatgggccacctggaccaaagggtgctaagggaagcaaa
ggaacacctaattacactggtgctcttccaggtcctcctggtgataaaggtagagatgga
gatcatggtcaaacaggaagcccagggaacattgggcctaagggtctccgtggccttcac
ggacttcgtgggcctcagggtgtagagggtcctaaaggtgtgaaaggatcacctggtgac
cctggaaaatcgcctagaggtgaaattggtgaacaaggcccacctggactacctggccca
cctggaccagaagaacagaaaggatatccttcagaacaatttttccaaaagggtgagaag
gggaataaaggtcagcacggaccatgtggactaaaggggcgtcgaggtgttggaggagat
atctacagccctagtcaaacaggacctaaaggagagcagggaatcctgggatttccaggg
gacaggggtagtcctggacagtctggtggagtcggattaactggacaagagggtgtccct
ggagacaaaggacttccagggctcattggcagaaaaggagaaaagggttggccaggggat
ccaggtccccctggtttcccacaatttcataatggaagtactgtgagaggtcctaaagga
gaccgtgggtatccaggtgcacccgggttccccggagagactggctatatgggtgtacca
ggccctccaggcccaccaggtttaccagaggcacatggccgacctggtcaaccaggtgac
cctggtgaaaagggtcagaagggagaaccagggacatacgatccaaatgaaatacttttc
attcagggaccaaagggagtaaaagggcatcaaggagaaagaggccgcgatggatgccct
ggtccacaaggatgtggaaattattactgcgagcctggttctctaggggaacctggtgaa
gatggacccagaggattttctggaaacaaaggcctaaaaggagtaaaaggttgtccaggg
gaatgtaagtgtgtgcatgctcttggggctgttgggccacctggtccacctggttatcca
ggatctccaggatttccaggagctccgggacctcagggggagcctggactgaggggaaat
gatggcccaagaggaccagatggcgcacctggtttcacaggtctaaaaggaagaaagggt
gagaaaggtgacacgtatgtgaggggtactaaaggtgcaaaaggggacaaaggagaacca
ggatacgctggtcctccaggaggaacaggtgagtctggaaaagatggcttccctggtccg
gtgggagaacctggtccaccaagtcctggctatatgggacgtcctggacccaaaggttat
ccgggccccccagggcccaaaggattccctggcccccatggtcccccaggtcctggattt
cctggtctaaagggagaacctggacttcaaggaaatcagggacttccagggcttcctgga
atcccaggacgactaggtccaccaggtgaaacagaaccatgctgtcatgaaggccaaatt
ggaccaccagggcctaagggtgagccagggttaccaggtgttcaaggtcaacctggaaga
gatggatatccaggaaatccaggacatcaaggacctaaaggtataaagggagatgatgga
gaaactctgatcggaccaccaggatctattggtacaaatggagatccaggtgaccctggt
cccgctggcattagcctggatggccctgaaggtctccctgggttaccaggaccccatggc
agaaaaggagacccaggacacatcctttcagcttggccaggtctagttggtcctcctgga
ccacgaggagctgtggggtcatacggaattcctggaatccctggatatccaggatcacca
ggattacaaggcccaccaggaccccaaggtcgcaagggagatcctggggacagtggagac
cttggagatactggtgtcccaggtccaccgtgtactgtttgtgaactggtaggtccccct
ggacctccaggaccttcagggcgccgtggtgaacaaggagtgccaggcctccctggtcag
aaaggtgtgaagggagatgttggtgcacctggtcgaggacagaagggtttaaaaggtaat
cctggtattcctggggctcctggcccagctggatcagcaggggttgttggtcctcaagga
gaccctggtattcatggcttcccaggacagaaaggtgagaagggcttgcctgggaagcct
gggtctagaagtatgcctggcaatcctgggcctccagggcaaccaggtgaaaagggagaa
agaggttttcctggtcgttatggaactacaggtgatccaggatttcctggtaacaaaggc
tcacctggacccactggactcccaggattatgttcgcttgtcaacttgacaaaaggtcct
tctggattttccggaagaagggggcctcctggtcagacagggtttgcaggatacaaaggc
agcactggcacgcctggtgatttgggtcctgatggatggccaggatcacaaggattaaaa
ggatttgctggtattccaggtagagaaggattatcaggactccgtggacttcatgggatt
aaagggttcccaggtccaaggggttattctgggaatactggagatcagggagatccaggg
ccaccaggacaaattggtatccctggcctcccgggatttcctggtgcaaaaggtaataaa
gggcaatcctatgggagacctggcccacaaggactcaaaggattacctggggagattggg
cccagtccacatagaggaagtccagggcatccaggtgacccaggacccaggggaaggcaa
gggcaacctggacatccaggggcgactggggaaactggaagacaaggagggccaggctct
cctgggtcccgaggtctaccagggcgtcaaggcattagaggtcctccaggtgacgaagga
attgtgggaccacccggcccccccggcccatggggcaatccaggtccccctggaactcca
ggtctggatggattgaatgggctaagaggtccgaaagggatgaagggagcagacgaccaa
ggcacttcaggacctcgtggacaaaagggtatacccggagccaaaggcgcccggggcatc
tcggggccagcgggggcaactattccaggggttaaaggccaaactggggcacctgggaac
acaggttttccaggaataccaggaacacctggtagctctggcaaaacctgccaaaacccc
cttcatggacctcagggtgatagaggctatgaagggctcccaggaccctcaggtcctcct
ggtccacctggtccacctggtggcagcatttcatacaaaggagaccttggaccagatggc
catcgtggaccaccaggtcataggggaaataaaggcgttccaggacctccagggcctcgt
ggccaaagtggctctccaggaccaaagggtgagaaaggtcctgatgggccaaggggccct
ctgggatccagaggtcaacagggcatctctggacctcaaggttgtaagggagaaattggc
ccaattggagatccaggtgtcaaaggtcaacctggtgatttaatcactgtagatttaagg
gttcctccccctggagccccaggaccaaaaggcgtttcaggaagtgaaggaagtcaaggg
tatgtgggtcgtcctggtccttttggtcgaacaggacaaaagggtcctaaagggtttgtg
ggctttcccggtacaccagggccacccgggttagatggttccagtggagacccaggcgat
gttggtgagcgaggatacactgggcctcaaggtgcccctggtcctcctggtgatccaggc
gagcctggccatagaaggcaacttagatcaggctttcttttggttatccacagccagtca
gttttggtaccacagtgtcctgcaggtagcaaccagctgtgggtgggatacagtctcgtc
tacctggaaggacaagagaaggctcacacacaggatctgggtcagcctggctcttgtctc
cccgttttctccaccatgcctttctcctactgcgacaaagacgcatgctactactccagt
cgcaatgacaaatcctactggctttccactactgctcctataccaatgatgccactctta
ggccaggagataagcctccacatcagccgctgtgttgtgtgtgagaccttttcaccagca
gtgccatttcacagtcaagaccaagcaattcctccctgcccagatggctggaagagttta
tggacaggatactccttccttctgcacacgggagcaggtgatgagggtggtggacaatcg
ttggcttcttctggtagctgcctcagggattttcgaactcatcccttcattgagtgtcaa
ggtgcgcagggttcctgtcactacttttccaatctttacagtttttggctaactactgta
agagatagagaggatttcgtccctgtaaagcctggtaccatcaaagcagctgatcagcag
cggcacaaggccagtcggtgtaatctttgccttcgggattaa
DBGET
integrated database retrieval system
