Poecilia formosa (Amazon molly): 103148312
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Entry
103148312 CDS
T07984
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103148312 (tnr)
04518 Integrin signaling
103148312 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103148312 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103148312 (tnr)
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103148312 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
Fn3_Dep-1_2nd
FN3_Tor_3rd
Fn3_VIN3
Interfer-bind
DUF4998
DUF7949
Motif
Other DBs
NCBI-GeneID:
103148312
NCBI-ProteinID:
XP_016534590
Ensembl:
ENSPFOG00000006777
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MPESKQLHCTTERTTMLALALLFALQGAAHAAPSGDNKLVRTTRVRRQIPEGDQFPSASS
VNQTLREQPLVFNHVYNINVPMESLCSVDLDASVAPDSHAELGSRPPAEGPGEPAGPTEY
AEQTLDAESQVTFTHRINIPKAACSCPAITTIQQLATRVEMLEREVSMLRAQCGSGCCGE
GSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWGGKNCSEPRCPNDCSGQGVCIEGECVCD
RDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCVNGTCQ
CRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDCNSVAPAMNLNARGVTDRTI
ELEWEGSIMVTDFLVTYTPSSPGGVQLEVRLPGNTSSWIITGLEAGIEYNINVFAVINNS
ISVPSSITVWTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQL
PSTITSFIQSGLRPGEEYTVNLVALREQGRSQPVTATFTTLIDGPTQLIVRDVSDTVAFV
EWTPPKAKIDQIVLRYGLVRGEGPRTTFRLQPTLTQYSLQVLRPGSRYEVSVSGVRKGNE
SGSISTEFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYSTLAGDQY
DKVIVPRNEGATTKTNLTDLLPGTEYGIGISAMKGINQSTPATMNARTGLDVPMDLTVTA
STDNSITLVWGVVQGPIDHYRVTYTSSSGITTELTVPKDITTTTLTDLDPGTEYTVTVAA
RRGRQQSTAATIDAFTGIRPVTHLYLSEGTSDSVLVAWSAPAPPADLFILSYSSADGTDT
SKVTLDGSKTRSLVQGLLPSTHYTFSLITIQGDVTSEPLTASLRTEMDPPKELAVSDVTE
DSVTISWIKPLAPFEYYKLSYQSARGRVDSEMIDSDVTNYTLSSLFPATEYEISLNAVRG
SQESRPVTTSVFTAMDMPAELTALNITPQGALLRWNPPLSNVDNYVLTITHNQLTADTFL
VEGHKHEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDAPVNLTASEVNHRSGL
ISWQPPIAEIDNYMLTYKTPDGSRKELILDAEDTWIRLEGLVESAEYTVKLQAARGLDTS
AVVSTTFTTGSRLFSTPQNCAQHLLNGETVSGVYTIYINRDPSQGVQVYCDMTTDEGGWI
VFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKIASQGRYELRIDMRDGQESVY
ANYDKFSIGDARNLYKLRIGEYNGTAGDSFSYHQGRPFSTKDRDNDIAVTNCALSYKGAW
WYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSTSV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatcaaagcaacttcattgcaccacagagcgcacaacaatgttggctcttgct
ctcctttttgctctacagggtgctgcacacgctgctccatcaggagacaacaagctggtt
cgaaccaccagagtgaggaggcagatcccagagggggatcagtttccctctgcttcctca
gtcaatcagacactacgagagcagcctcttgtctttaaccacgtgtacaacattaacgtg
ccgatggagtctctgtgctccgtcgacctggatgcatctgtggccccagattctcacgct
gagttgggatccagacctccagctgagggaccaggggagccagccgggccaacagaatac
gcggagcagactcttgatgcagagagtcaggtgacgtttacgcaccgcatcaacatacca
aaagcagcgtgcagttgtccagcaataaccacaatccagcaactcgccaccagagtggag
atgctggagagagaggtgtccatgctcagagctcagtgtggatctggatgctgtggggaa
ggctctgccatgggtcgtctggactttgtcccgggttgcagcggccacgggagcttcagc
tttgatctgtgtggctgcatctgcgaggaaggctgggggggcaaaaactgctccgagcct
cgttgcccaaatgactgctccggtcagggggtgtgcatcgaaggggagtgcgtgtgtgat
cgggactttggaggcgacaactgttcagagccacgatgcccctccgactgctcaggcaga
ggcctgtgcatcgatggagaatgcgtgtgcgaggagtccttcacaggcgaagactgcatg
gtcggacggtgtctcaacgactgctcggatcaggggttgtgtgtcaacgggacgtgccag
tgccgccccggctatgtgggagaagactgttcgttggtctactgcgccaacaactgtagc
aagaagggagtctgcaaggagggtttctgtgtctgccaggatggctttgctggagatgat
tgtaactcagtggcacctgccatgaatttaaatgcacgtggagttacagatcgtactatc
gagctggagtgggaagggtccattatggtgacagatttcttggtgacctataccccaagc
agccctggaggtgtgcagctagaagtgaggctcccaggaaacacatcatcttggattatc
acaggtcttgaagcgggcatagagtacaacatcaatgtgtttgctgtcatcaacaactca
atcagcgttccctccagtatcactgtttggacgtatctctccaatccagatggattagtc
ttcaaatctatcacagagacatcagtggaagtccaatggcaaccgttttactattccttt
gatgggtgggagatcagcttcatccccaaggacaatgatggcggcatgacggcccagctg
cccagcaccatcacctcatttattcagagcggtctgaggcccggggaggaatatacagtc
aacctggtggcgctcagagagcagggtcggagccagcccgtcactgctaccttcacaacc
ttgattgatggtccgactcagctgattgtgcgtgacgtgtcggacaccgtagcctttgtg
gagtggacaccaccaaaagcaaagatcgatcagattgtgttgcgttacggccttgtgaga
ggagagggcccgcggaccacctttagactccagcccacacttacccagtactcgttacag
gttctgcgtcctggttcacggtatgaggtgtctgtaagcggagttaggaaaggaaatgaa
agcggctctatctctactgaatttacaaccgctttatcattcttctcagagatcgatgcc
cccaagaacttacggctcgtgtccaagacctcgactaccctcgagcttgaatgggataac
agtgaggctgaggtggaggggtatcaggtggtgtacagcactttagcaggagatcagtat
gataaagtgattgtgccacgcaacgagggtgccaccactaagaccaatctcacagacctt
ctgccggggacggagtacggcattggcatctctgccatgaagggtatcaaccagagtaca
ccagcaacgatgaatgccaggacaggcctggatgtacccatggatttaactgtgacagct
tctactgacaactccatcactctggtgtggggtgtagtccagggtccaattgaccactac
agggtcacctacacatcttcctctggtatcacaactgagctgacagttcctaaagacata
accaccacgactctgacagaccttgaccctggaactgaatatacagtcacggtagcagcg
agaagagggaggcagcagagcactgcagcaaccatcgatgcctttacagggatcaggcct
gtaacccacctttacctgtcggaagggacgtcagattcagtgttggtggcatggagtgcc
ccagcgccacccgctgacctcttcattctgagctacagctctgctgacgggacagacact
tctaaggtgacactagatggctccaagacgaggtcactggtccagggcctgctgccgtcc
actcactacacgttcagtttaatcacaatacaaggggatgttacctctgagccccttacg
gcatccctcaggacagaaatggaccctccaaaggaactggcggtctcagatgtgacggag
gattcagtgaccatctcttggatcaagccactggctccctttgaatattataagctctcc
taccagtcagccagaggtcgagtggacagcgagatgatcgacagcgatgtgacaaactac
accttgtctagtctgtttcctgccacagagtacgagatcagcctcaatgctgtcagaggg
agtcaagagagcagacctgtcaccacgtctgtcttcacagccatggacatgcctgcagaa
ttgacagccctcaacatcactccacaaggtgccctgctgaggtggaaccctcccctgtcc
aatgtggacaactacgtgctgaccatcacacataaccagctgacagcagacactttcctg
gttgaaggacacaagcatgagcaccagctgtccaacctcaagccaagcaccacctactca
gtggccctgtatgccaccaaaggacccctgacaagtggcactgtgatcaccaaccttcag
acacccatggatgcacctgtgaacctgacggccagtgaagtgaaccaccgcagcggtctc
atttcctggcagccgccaatcgcagaaatagacaactacatgctcacttacaaaactcct
gatggcagccggaaagagctgattcttgatgcagaggacacatggattcgactggaggga
ttggtggagagcgcagagtacacggttaagctccaggctgctagagggcttgataccagt
gctgtggtttccaccacctttactacagggagccgtctgttttcaacacctcagaactgt
gcccaacacctgctgaacggggagactgtgagtggcgtctacaccatttacatcaacaga
gatccgagccaaggggtgcaggtgtactgtgacatgaccacagatgaaggaggctggatt
gtgtttcagcgtcgtcaaaatggtctgactgacttttccaggaagtggagtgattatcga
gttggatttggaaaccttgaggatgagttttggcttggtcttgataacatccagaagatt
gcttctcagggacgctatgagctgagaattgacatgagggacggacaggaatcagtttat
gccaattatgacaaattttccattggagatgcaagaaacctctacaagctcaggatagga
gaatataatggcactgctggtgactctttcagctaccaccagggccgcccattctccact
aaagacagagacaatgacattgctgtcactaactgtgccttgtcctacaaaggagcctgg
tggtacaagaactgccaccgggccaacctcaacggaaaatatggcgagtccagacacagt
cagggtatcaactggtaccactggaaaggccacgagttttccattccctttgtggagatg
aagatgaggcccttcaactttcgcagtatcagcagtaagaggagacgatccacctctgta
taa
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integrated database retrieval system