Poecilia formosa (Amazon molly): 103148321
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Entry
103148321 CDS
T07984
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor04382
Cornified envelope formation
pfor04510
Focal adhesion
pfor04512
ECM-receptor interaction
pfor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103148321
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103148321
09142 Cell motility
04820 Cytoskeleton in muscle cells
103148321
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103148321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfor04147
]
103148321
00536 Glycosaminoglycan binding proteins [BR:
pfor00536
]
103148321
Exosome [BR:
pfor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103148321
Glycosaminoglycan binding proteins [BR:
pfor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103148321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103148321
NCBI-ProteinID:
XP_007567094
Ensembl:
ENSPFOG00000002745
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MRPQAIIVFLTFFVMISTFTEGKSCVCNGKSRCHCKGVKGNRGEKGFPGDPGLPGSEGHP
GSLGQPGPTGPKGNTGSDGPMGSKGDPGPDGKEGFAGSHGLPGVPGLQGPLGPPGYPGCN
GTDGDPGLPGVEGDPGIDGNPGPPGQPGPKGDSQTTADSVPGPQGPRGKDGRPGSPGLPG
EIGLRGDIGLRGPPGSPGNTGAPGTKGQEGAPGTRGPKGFQGPPGPPGPPGRTKDFFTGT
LSITDLKGDRGDAGDKGCKGEPGDPGSLYHTKGQKGDRGNPGPEGKPGKDGEPGNPGFRG
RPGRRGEPGHPGPLGGMGEKGNRGPSGPPGDILLLEPLKGHIGDPGPPGLPGFPGTRGVL
GFPGPPGSPGYALGIYVPGERGFAGPKGHNGDPGEPGGFYTGPPGLDGDPGDPGPRGNQG
KPGRFVNGTDCVIKGLPGIKGVKGLPGPPYVHCHSGTNQGRGEKGDPGFPGPSGLPGPPG
SVGLPGFPGQPGQKGEPSGNVSPGLKGEKGEPGLPGGPGPNGSPGSPGLPGSKGTPGPPG
ELCERLGVEGDPGFPGPPGPQGKEGPIGYPGPAGYGPPGPPGTKGDTGVPGLPGEPGIPG
QKGESGHFHTQGPPGPQGFQGPPGFEGSPGVQGVPGVPGNPGKAGQKGERGDLLLSGKPG
PPGQKGDKGLPGPPGAPGWGSPGQFGPPGPPGAPGEKGDSGHGHPGRPGPPGPPGENGAP
GPAGDPGIPGLPGNPGIIGKPGPPGEKGRKGSLGPPGLPGTKDLCIGLPGPIGRPGPDGH
TGDTGANGSPGEKGNAGLPGFGSPGLQGGPGPSGLSVPGPHGPPGQKGSRGRDGWPGQRG
QIGDPGSDGISGRGPDGKPGNTGQPGPRGDPGPDGARGRQGPQGMVGDPGVRGPPGLPCP
TRFYNGPPGNPGEPGNSGLLGLTGDPGRPGPKGQRGRAGPPGDLGQRGPPGEPGVDGQAG
SEVRRGPDGAPGDSGHKGHPGLKGVKGDPGIPGRPGPDGVPGPTGSKGAAGEPSYVYGPP
GPPGQKGEPGSSSDVMLRGQKGEPGIAGQVGAPGSPGAKGNTGPDGKNGSPGFPGLIGSD
GPPGIKGHMGPIGLPGIPGPTGHTGQRGIKGSQGLDGIPGPPGQKGDTVIIGGAQGRPGD
PGPPGPPGDVGPPGLLGRGSPGPEGDRGTPGLPGLHGESGLPGREGTCIPGPKGDRGFPG
NPGNQGYPGPPGPQGLRVSGSKGDRGEPGFPGSPGFGGPPGNPGPQGPYGPPGVNGFPGL
RGDPGPSGRHGPLGDRGDPGYSPGPCGPRGHKGFPGRPGRKGEPAYVDRIHEPGPPGLPG
PKGNPGLPGAIGPPGSQGPPGPPGVRGPHGVSSPGPPGFTGHTGDKGKAGLPGQVGGPGI
PGRKGLRGLPGRAATHYTDGFLIARHSQSIKVPDCPHGTSLIYSGYSLLFINGNERAHGQ
DLGTIGSCLPHFSTMPFLFCDTESTCRYASRNDYSYWLSTDKLMPANMVAVTADKVAPYI
SRCSVCETASKIIAFHSQNTLIPECPRGWETLWTGYSFIMQTGAGAEGSSQPLMSPGSCM
ENFRRVPFIECHGRGTCNYYPDSYSYWLASLDRNNMFSKPVPQTVKGFSLQRVISRCRVC
RKS
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgagaccacaagcgatcatagttttcctgactttctttgtaatgatctcgacattcact
gaaggaaaaagttgtgtatgcaatggaaagtcaagatgccactgtaaaggagtaaaaggc
aacaggggagagaaaggttttccaggagatccgggtcttccaggatcagaggggcaccca
ggatccttgggtcaacctgggccaacaggaccaaagggcaatactgggtctgatggaccg
atgggatcaaaaggcgatccgggaccagacggcaaggagggatttgctggatctcatggc
ttgccaggtgttccaggtttacaggggcctctagggcccccgggttatccaggctgcaat
ggaacagatggagaccctggacttccaggtgttgaaggagatcctggtattgatggaaat
ccaggacctccaggtcagcctggtcctaagggtgactcacagacaacagctgactcagtg
ccagggccacaaggaccacggggaaaagatggaagaccgggttctccagggttaccaggt
gagataggactacgtggggacattggactaaggggcccccctgggtctcctggtaatact
ggagctcctggtaccaagggccaggaaggagctccaggaactcgaggaccaaagggtttc
caaggcccacctggcccgcctgggcctccaggcaggactaaggacttttttaccggcacc
ctgtcaataacggatttaaaaggagatagaggcgatgcaggagacaaaggatgcaaaggc
gaacctggagatcctgggagcctctaccacacaaaagggcaaaagggagacagaggaaac
ccaggcccagaaggaaagccaggaaaggatggtgaacctggaaatcctgggtttagggga
agaccaggacgcagaggagagccaggacatccaggcccactaggaggaatgggtgaaaag
ggaaacaggggtccatctggtccacctggagatatacttttgctcgaaccactcaaggga
cacattggagatcctggccctccaggtctccctgggttccctgggacccgaggtgtttta
gggtttccggggccccctggatctccaggttatgcacttgggatttatgtaccaggtgaa
cgtgggttcgcaggcccaaaagggcacaatggagaccctggggaacctggggggttttac
acggggcctccagggctagatggtgatcctggtgatccagggcctcggggaaaccaaggc
aaacctggacgctttgtaaatggaactgactgtgtcattaagggtctccctgggatcaag
ggagttaaaggtttaccaggacctccatatgtccactgtcactcaggcactaatcaagga
cggggtgaaaagggggatcccggctttccaggtccttcaggtttaccaggacctccaggg
tctgtaggtctaccaggattcccaggccagccggggcaaaagggagagccatccggtaat
gtctctccagggctgaagggggaaaaaggagaaccaggactccctggaggacccggtcca
aatggttctcctggatctccgggtttaccaggaagtaaaggcactccagggcctcctgga
gaattgtgcgaacgccttggagtagaaggagatcctgggtttcctggtccaccaggacct
caagggaaagaaggacccattggctaccctggaccagcgggttatggacctcctggtcca
ccagggaccaaaggagacactggtgtacctggtctgccaggagaacctggaattccaggc
caaaaaggcgaatctggtcattttcatacccaaggcccaccaggaccacaaggatttcaa
ggaccgcctggctttgaaggaagtccaggtgttcaaggagtaccgggtgtccctggaaat
ccaggcaaagcaggacaaaaaggagaaagaggggacttgttacttagtggaaagccagga
cccccagggcagaaaggtgataaggggctgcctggccctccaggtgctccaggttggggt
tcacctgggcagtttggtccaccaggccctcctggtgcccccggagaaaagggtgacagt
ggccacggacaccctggtcgtccgggtcctccgggaccacctggtgaaaatggagctcca
gggcctgccggcgatcctggaatccctggtcttccaggaaatcctggaataattggcaaa
cccgggcctccaggagaaaaaggaagaaaaggttctcttggccctccagggcttcctggt
accaaagatttatgtatcggtttgcctggaccaataggacgtccaggaccggatggacat
acaggagatacaggagctaatggctcacctggagagaaaggtaatgcgggtttacctgga
tttggttctcctggccttcaaggtggtcctggaccctctggattgtcagttccgggtcca
catgggcctccagggcagaaaggatctcggggtcgagatggctggcctggtcaaagagga
caaataggagaccctggatctgatggtatatctggacgtggaccagacggaaaaccaggg
aatacaggacaacctggaccaagaggggacccaggcccagacggagcaagaggtcgtcaa
ggaccccaaggcatggtgggggacccaggtgttagaggccctccaggacttccttgtcca
acacgcttctacaatgggcctccgggaaaccccggagaaccaggaaattctggattactt
ggtctcactggcgatcctggaagacctggaccaaaggggcagagaggaagagctggacca
ccaggggatctggggcaaagaggtcctcctggagaacctggcgttgatggccaagcggga
tccgaagttaggcgaggaccagatggagccccgggagattctggtcataagggtcatcct
gggctcaaaggagtgaagggagatcctggaattcctggaaggccgggaccagatggtgtt
ccaggtccaacaggcagcaaaggagctgctggagaaccaagctatgtgtacggaccacct
ggaccacctggacaaaagggtgaaccagggtccagcagtgatgtcatgctcaggggacag
aaaggggaacctgggattgcaggtcaagtaggtgctccaggaagccctggagccaagggg
aacacaggacctgatggaaaaaatggttccccaggatttccgggtctaattggttctgat
ggtcctcccggaataaaaggacacatgggacctattggactaccaggcattccaggccca
acaggccatactgggcaacgtggtataaaaggaagccagggacttgatggtattcctggg
ccgccgggtcaaaaaggggacactgttataataggaggagcacaaggaagacctggagat
ccaggcccaccaggtcctcctggggatgtcggtccgcctggtttgctcggcagagggagt
ccgggaccagaaggggacaggggaactccaggtctacctggacttcatggtgaatcagga
ctaccaggaagagaagggacttgtattccaggacctaaaggtgatcgtggattccctggc
aacccaggaaaccaaggctaccctggtccaccaggccctcaaggtctcagagtatcaggg
tcaaaaggagacagaggagagccagggttcccaggaagcccaggttttggtgggccccca
ggaaacccaggccctcaaggaccatatggtccaccgggtgtaaatggattcccaggacta
agaggagacccgggtccctcagggagacatggcccccttggtgacagaggagatcctgga
tacagcccaggtccatgtggtccacgtgggcacaaaggcttccctggacgcccgggtcgc
aaaggtgaaccggcctatgttgacaggatacacgaaccaggacctcctggattacctggt
cctaaaggcaatccaggacttccaggagcgattgggccaccaggatcacaaggaccgcca
ggaccacctggcgtcagaggaccacatggagtgagctctcctggtcctcctggattcact
ggccacacaggagacaagggaaaagcaggattgccaggtcaagtaggcggaccaggaatt
cccggccgaaaaggactgagaggtttgcctgggagagcagctacacattacacagatggc
tttctgattgccaggcacagtcagagcattaaggtccccgactgccctcatggcaccagt
ctcatctactctggttattccctcctcttcatcaatggaaacgagagagctcatggccag
gaccttggcaccattggaagctgcctccctcatttctccaccatgcccttcctgttctgc
gacacagaaagcacctgccgctatgcttctcgtaatgactactcctactggctgtccact
gataagctcatgcccgccaacatggttgccgtcacagctgataaagttgccccctacatc
agcaggtgctcagtttgtgaaacagcctccaaaatcatagctttccatagccagaacact
ctgattcctgaatgtcccagaggttgggagaccctgtggactggttactcgtttataatg
caaaccggagcgggagcagaaggctcctcccaacccctgatgtctcccgggtcatgcatg
gaaaatttccgccgagtgccttttattgagtgtcacggcagaggcacttgtaattactac
cctgattcctacagctactggctagcctcccttgacagaaacaacatgttcagtaaaccg
gttccccagactgtgaaaggattttctctacagagagtcatcagtcgttgtcgggtctgc
agaaaatcctga
DBGET
integrated database retrieval system