Poecilia formosa (Amazon molly): 103148675
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Entry
103148675 CDS
T07984
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfor03036
]
103148675 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pfor04812
]
103148675 (nedd1)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
103148675 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
103148675 (nedd1)
Cytoskeleton proteins [BR:
pfor04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
103148675 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Complex1_LYR
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Complex1_LYR_2
EIF3I
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ZapB
NBCH_WD40
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
103148675
NCBI-ProteinID:
XP_016534845
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVSMATLEQFNPHSGSHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSAPVPVVELADGKKQTRVCLSSSSQFLVSGGLDQCVHMWDLKSKRLHRSLKDHKE
EVTCVSFNANDSCIVSGSTSGDLVLHSLTTNLSSRAFGHGSNQPIHDLRLSTVKRSLLGS
VSDGGTMVLWDANTQRELQVFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIICYDTASKL
VLRAIRVDGPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSSPTRVTVAHKTSVTCLRFQ
SNASKLKSSRLGSARTSSSKRSSSKLGSQPDPAPSAGPAPQKQVTCTAEGTSAEVMCREG
EGQQGAEQHPQGEKFGIVGRNSLDVFSPPREGPDPGTQGVVGDASFGRSQVTGVESEGQQ
LVGRASLDIFSPVREDSHSGGGSQRRTPLGTHRGATGGRSYSPLSIFLSPQTIKEEEPTN
VAAAAFEPSDRKPERSSGSSQEGEAPTLPTTTQQTNQSQAVTPFYTPEPSLRGANGIQTQ
LSYGSSAAAAAASGSAAMAAACSSLSQNIADVVGQDGAAPLTSLQIHFIQNMIHETLEEF
RTACHQDILNLQVEMIRQFYIQLTEIHGLIEKYSVNESLVEEIERLREENRQLKANYFAF
GSPESPEVTWTALWMMANPLRSEVVRLYKNLLYLGREYPKGGDYFRDRLRAAFTKNKSVQ
DPEQIKAMIARGEYVARELEALYYLRKYRAMKKQIKRFPKHLFGKFWFCEDFPLQNMFHP
VFCEENPVIGVFCPAEGTSAEVMCREGEGQQGAEQHPQGEKFGMVGRNSLDVFSPPREGP
DPGTQGVVGDASFGRSQVTGVESEGQQLVGRASLDIFSPVREDSHSGGGSQRRTPLGTHR
GATGGRSYSPLSIFLSPQTIKEEEPTNAAAAAAAAGFEPSDRKPERSSGSSQEGEAPTLP
TTTQQTNQSQAVTPFYTPEPSLRGANGIQTQLSYGSSAAAAAASGSAAMAAACSSLSQNI
ADVVGQDGAAPLTSLQIHFIQNMIHETLEEFRTACHQDILNLQVEMIRQFYIQLTEIHGL
IEKYSVNESLVEEIERLREENRQLKANY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcgcctggtgtcaaccggagactgtgtgaagatctgggatgcggtt
tccatggcgactctggagcagtttaacccccacagcggcagccatcccgttgctcaggcc
tgctggagctccaacaatcagtatctggtgagtgccagcagcagcggagacaagctggtg
gtttccagcctcaagtcggctcctgttccagtggttgaactggccgatgggaaaaaacag
acccgggtgtgtctgagttcctcatcccagtttctggtcagtggcggtctggaccagtgt
gtccacatgtgggacctgaagtccaagaggctgcaccgctccctcaaagaccacaaagaa
gaggtcacctgcgtgtccttcaacgctaacgacagctgcatcgtctccggctccaccagc
ggcgacctggtcctgcacagcctgaccaccaacctgtccagcagagctttcggccacggc
agcaaccagcccatccatgacctgcggctgtccacggtgaagcgctcgctgctgggaagc
gtgtctgatggcggcaccatggtgctgtgggacgccaacactcagagggagctgcaggtg
ttcgacggcgcccataaggcgcccggctcggggttggccttctccccgaccagcgacctg
cttgtcgtcagcgtcggcctcgataagaagatcatctgctacgacacggccagcaaacta
gtcctgcgggcgatccgtgtggacggccctctgacctcggtggacttcacgctggacggc
accggcctggtggtcgggtccactcaggggaaaatctaccagtacgacctgaggaactcc
agcagccccaccagagtcacagtggcccacaaaacctccgtcacctgcctgcgtttccag
agtaacgccagcaaactcaagtccagtagactggggtctgccaggacttccagttcaaag
agatccagttccaaactgggcagtcagcctgaccccgcccccagcgcaggccccgccccc
cagaaacaggtcacctgcacagcagagggcaccagcgcggaggtgatgtgtcgtgagggt
gaaggccagcagggggcagagcaacatcctcagggggagaagttcgggatcgtgggacgg
aacagtctggacgtcttctctcctcctcgcgaaggtccagacccggggactcagggcgta
gtaggagacgcttcctttggaagatcacaggttaccggtgtggagagcgaaggtcagcag
ctggtgggacgggccagcctggacatcttctctccggtcagagaagactctcactcaggt
ggtggctcacagcgccggacacccctggggacccaccggggcgccactgggggccggtcc
tacagcccgctgtccatcttcctgtccccgcagacgatcaaagaggaggagccgaccaac
gtcgccgccgccgcctttgagccatctgacaggaagcctgagaggagcagtggctccagc
caggaaggggaagctccgactctgcccaccacaacccagcagaccaatcagagtcaggcg
gtgacgcctttctacactccagaaccgagcctccgtggagccaacggcattcagactcag
ctcagttacggctcatctgccgccgcagcagcagcttcaggttcagctgcgatggcagcg
gcttgctcgtctctgtcccagaacatcgcagacgtggtcggacaggacggcgccgctccg
ctcacgtccctgcagatccacttcatccagaacatgatccacgaaacgctggaggagttc
aggaccgcctgtcaccaggacatcctcaacctgcaggtggaaatgatccggcagttttac
atccagctgacggagatccacggtctgattgagaaatattctgtcaacgagtctctggtg
gaggagatcgagaggctgcgggaggaaaaccgccagctcaaagcgaactacttcgccttc
ggttcaccggagagtccggaggtcacctggacagctctttggatgatggccaaccctctg
cggtctgaggtggttcggctctacaagaacctcctctacctcggccgggaatacccgaaa
ggcggcgactacttcagggaccgtctgagagcggcgtttaccaagaacaagtcggtccag
gacccagagcagatcaaggccatgatcgcccggggggagtacgtggcgcgggagctggag
gcgctctactacctgaggaagtaccgggcgatgaagaagcaaattaagcgcttcccaaaa
cacttgtttggaaagttctggttctgtgaggattttcctcttcaaaacatgtttcatcct
gttttctgtgaagaaaatccagtgattggagtgttctgtccagcagagggcaccagcgcg
gaggtgatgtgtcgtgagggtgaaggccagcagggggcagagcaacatcctcagggggag
aagtttgggatggtgggacggaacagtctggacgtcttctctcctcctcgcgaaggtcca
gacccagggactcagggcgtagtaggagacgcttcctttggaagatcacaggttaccggt
gtggagagcgaaggtcagcagctggtgggacgggccagcctggacatcttctctccggtc
agagaagactctcactcaggtggtggctcacagcgacggacgcccctggggacccaccgg
ggcgccactgggggccggtcctacagcccgctgtccatcttcctgtccccgcagacgatc
aaagaggaagagccgaccaacgccgccgctgccgccgccgccgccggctttgagccatct
gacaggaagcctgagaggagcagtggctccagccaggaaggggaagctccgactctgccc
accacaacccagcagaccaatcagagtcaggcggtgacgcctttctacactccagaaccg
agcctccgtggagccaacggcattcagactcagctcagttacggctcatctgccgccgca
gcagcagcttcaggttcagctgcgatggcagcggcgtgctcgtctctgtcccagaacatc
gcagacgtggtcggacaggacggcgccgctccgctcacgtccctgcagatccacttcatc
cagaacatgatccacgaaacgctggaggagttcaggaccgcctgtcaccaggacatcctc
aacctgcaggtggaaatgatccggcagttttacatccagctgacggagatccacggtctg
attgagaaatattctgtcaacgagtctctggtggaggagatcgagaggctgcgggaggaa
aaccgccagctcaaagcgaactactga
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