Poecilia formosa (Amazon molly): 103149544
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Entry
103149544 CDS
T07984
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfor03009
]
103149544 (dcaf13)
04121 Ubiquitin system [BR:
pfor04121
]
103149544 (dcaf13)
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
90S particles
Other 90S particles
103149544 (dcaf13)
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103149544 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
ANAPC4_WD40
KNTC1_N
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
103149544
NCBI-ProteinID:
XP_007568857
Ensembl:
ENSPFOG00000019444
UniProt:
A0A087YNG5
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKVLSRNPDDYVRETKHDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPRSLSTLLSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRHC
GTSFFTIGDDKTIKHWKMEAPGYGEEEEPLNTILGKAVFTGLDHHQKNAVFATCGHQVDI
WDEQRSTPIRSFTWGVDSFSSVRFNPVETELLGSCASDRSIVLYDMRESTPLKKVIMTMR
TNTISWNPMEAYYFTCANEDYNLYTYDMRHLENPVKVHIDHVSAVLDVDYSPTGREFVSA
SFDKTIRIFPKDSANSREVYHTKRMQHVICVKWSADNKYVLSGSDEMNIRLWKANAAEKL
GVLSPREKQAIHYSQKLKEKFQHHPQIKRIARHRHLPKVIYHQKNELKVMKEARRRKERN
VRKHSKPGSVPVVSEKEKHVVSVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaggtcctttcaagaaacccggatgattatgttcgggaaactaaacacgat
attcagcgagtccccaggaactacgacccctcccttcatccgttcgaggtgagcagagaa
tacactcgggctctgaacgccaccaagttggagcgcgtgtttgccaagccttttctggcc
tccctggatggacacagagacggggtgaactgtctggccaagcacccccggagtctctcc
acgctgctctctggctcctgcgatggcgaggtcaaagtgtggaatcttaccaaacatgag
tgcgtccgcactctccaagcgcatgaagggtttgtccggggaatggttgtcagacattgt
ggtacttccttctttacgatcggagacgacaaaaccataaaacattggaaaatggaagcg
ccgggctacggagaggaggaggagcctcttaacaccatccttggcaaggctgtgttcaca
ggactggaccatcaccagaagaacgctgtgtttgcaacatgtggccaccaggtggacatc
tgggacgagcagaggagcacccccatccgctccttcacctggggcgtcgacagcttcagc
tccgtccgttttaaccctgtggagacagaactccttggaagctgtgcctctgacagaagt
atagttttatatgacatgagggaatcaacgcctcttaaaaaggtgatcatgacaatgagg
accaacacgatcagctggaacccaatggaagcttactacttcacttgtgcaaatgaagac
tacaacctgtacacatacgacatgaggcatctggagaatcccgtcaaagtgcacattgac
cacgtctccgccgtgctggatgttgactactctcccaccggacgggagtttgtctccgcc
agttttgacaagaccatccgcatcttccccaaagactcggcaaacagcagagaagtctac
cacaccaagcgcatgcagcacgtcatctgcgtgaagtggtcggcggacaacaagtacgtc
ctgagcggctcggacgaaatgaacatccggctgtggaaagcgaacgcggcagagaagctg
ggagtgctgtctcccagagagaagcaggccattcactacagccagaagctgaaggagaag
ttccagcaccacccacagatcaagcgcattgctcgccaccgacacctgccaaaggtcatc
taccaccagaaaaatgagctgaaggtcatgaaggaggcccgccgtcgaaaggagaggaac
gtccgtaagcacagcaaaccaggaagtgtgcctgtggtgtctgagaaggagaaacatgtt
gtcagtgtggtgaaatag
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