KEGG   Poecilia formosa (Amazon molly): 103149697
Entry
103149697         CDS       T07984                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
pfor  Poecilia formosa (Amazon molly)
Pathway
pfor03420  Nucleotide excision repair
pfor04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pfor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103149697 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103149697 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pfor04121]
    103149697 (ddb1)
   03400 DNA repair and recombination proteins [BR:pfor03400]
    103149697 (ddb1)
Ubiquitin system [BR:pfor04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     103149697 (ddb1)
DNA repair and recombination proteins [BR:pfor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      103149697 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      103149697 (ddb1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Glyco_trans_4_2
Other DBs
NCBI-GeneID: 103149697
NCBI-ProteinID: XP_007569041
Ensembl: ENSPFOG00000002768
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHKQLIQITSGSVRLVV
QDSKALVSEWKEPQGKNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVAC
LDITPLGEGGNESTLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYSLSIVSCRLGKDPSVYFIVGTAMVYPEE
PEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLTKVIKSVGKIEHSFWRSFHTER
KTEQGTGFIDGDLIESFLDLSRAKMQEVVSTLLIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcttataactacgtggtaacagcacagaagcccacggcagtgaacgcctgcatcaca
ggtcacttcacctctgctgaggaccttaatttgctcatcgctaaaaacacacgtctggag
atctatgtggtcacagctgagggacttagacctgtcaaggaagttggcatgtatggcaaa
attgctgtcatggagctcttccgtccaaagggtgagagcaaagacctgctgttcattctc
acatccaagtacaacgcatgtatcctggaatacaaacagaacggggagagtattgacatc
atcacccgtgcccatggcaacgtccaggatcgcattggacgtccatcagaaactgggatt
attgggattgttgacccagaatgccgcatgattggtctgaggctgtacgacggattgttc
aaggtgatcccgttggaccgggacaaccgagagctgaaggcgttcaacatccggctggag
gagctgcaggtcatcgacgttcacttcttgtatggctgccaggctccgaccgtctgcttc
atctaccaggaccctcaaggacgtcatgtaaagacctacgaagtttctctgagagagaag
gagttcaacaagggcccttggaaacaggagaatgtcgaggctgaagcatccatggttatt
ccagtgccagagccatttggtggcgctataatcataggacaagagtcaatcacctaccac
aatggggacaaatacctggccattgctccaccaacaatcaagcaaagtaccattgtctgc
cacaaccgggtggaccccaatgggtcgcgctacctgctgggagacatggagggtcgtctg
ttcatgctgctcctggagaaggaggagctaatggacggcaccgtggctctgaaggacctg
catgtggagctgctgggagagacctctatagctgagtgcttgacctacctggacaatggt
gtggtgtttgttggatccagattgggagactcccagcttgtgaagcttaacgtggacagc
aacgagcagggctcctacgtcacggtaatggagacgttcaccaatctggggcccattgtg
gacatgtgtgtggtggacctggagaggcagggtcagggccagctggtgacatgctctggc
gcgttcaaggagggttctctgcggatcatccgcaacggcattgggattcacgagcatgcc
agcatcgacctgccgggaatcaaaggtttgtggccacttcgctctgaggcaggccgggag
actgatgatatgttggtactgtctttcgtgggtcagacgagagtgttgatgctgagcgga
gaggaggttgaggaaaccgagctgccaggttttgtggacaaccagcagacattttactgt
ggaaatgttgcacacaaacaactcattcagatcacatcaggctctgtgcgcttggtggtc
caggacagcaaggccttggttagtgaatggaaggagccgcagggcaagaacatcagcgta
gccgcctgcaatcatacacaagtggtgctcgctgtgggacgagcattgtactacctgcag
atcctcgcaggagagctcaaacagatcagcaccacagagatggagcatgaggtggcctgc
ctggacatcacacctctgggggagggtggcaacgagtccacgctctgcgctgtgggactg
tggaccgacatctctgcacgtgtgctcaaactgccctgtttcacggctctgcacaaggaa
atgctgggtggagagatcatccctcgctccatcctaatgaccacctttgaaggcagctac
tacctgctgtgtgccctgggagacggagcactcttctactttggtcttgacctacagact
ggagccctcagcgagcgtaagaaggtcactcttggcacgcagcccaccgtgctgcggacc
ttcagatcgctgtccacctcaaacgtcttcgcctgctccgaccggcccactgttatctac
tcatccaaccacaagctggtgttttccaacgtcaatctgaaggaagtcaattacatgtgc
ccactcaactctgagggctacccggacagtctggctttggccaacaacagcacactgacc
atcggcaccattgatgaaattcaaaaactccatattcgcacagttcccctctacgagtct
ccaaggcggatctgttaccaggaggtttcacaatgtttcggggttctgtcgagccgggtg
gagatccaggatgttagcggcaccacgtctgccgtacggcctagtgcaagcacacaggcg
ctctccagcagtgtgagctccagcaagctcttccccagcagcacttctccacatgagacc
tcctttggtgaggaggtggaggttcacagtctgctcgtcgtggatcaacacacctttgaa
gtccttcatgcccatcagttcctccccagcgagtattctctcagcattgtgtcatgtcgc
ctgggaaaagacccatctgtttacttcatcgtcggcacggccatggtttacccagaggag
cccgagcccaagcagggtcgaatcattgtcttccattataccgacgggaagctgcaaacc
gtggctgagaaagaagtgaaaggagccgtctattctatggtggagttcaatggaaaacta
ctggccagcataaatagcacagtccgtctgtacgagtggacggctgagaaggagctgagg
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaaaggggatttc
atcctggtgggagacctgatgaggtctgtcctgctgctggcgtacaaacccatggagggc
aactttgaagagattgctcgtgactttaatccaaactggatgagtgccgtggaaattcta
gacgatgacaacttcctgggagcagagaacgccttcaacttgttcgtctgccaaaaagat
agtgcggccaccaccgacgaggagcgccagcatctgcaggaggtcggggtctttcaccta
ggcgagtttgtaaatgtcttttgccatggctcactggtgctgcagaacctgggggagagc
tccacacccacccagggatccgtactcttcggcaccgttaacggcatgatcggtctggta
acgtctctgtccgagggctggtacagcctcctgcttgacctacagaaccgcctcaccaag
gtcatcaaaagcgtgggcaagatcgagcacagcttctggaggtctttccacacggagcgc
aagacggagcagggcacaggcttcatcgacggggacctgattgaaagcttcctggatctc
agtcgggcaaagatgcaggaggtcgtcagcactctgctgatcgatgatggcagcggcatg
aagcgtgaagccacagtggacgaggtgattaagatcgtagaggagctgacgaggatccac
tag

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