Poecilia formosa (Amazon molly): 103149697
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Entry
103149697 CDS
T07984
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03420
Nucleotide excision repair
pfor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103149697 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
103149697 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfor04121
]
103149697 (ddb1)
03400 DNA repair and recombination proteins [BR:
pfor03400
]
103149697 (ddb1)
Ubiquitin system [BR:
pfor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
103149697 (ddb1)
DNA repair and recombination proteins [BR:
pfor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103149697 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103149697 (ddb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Glyco_trans_4_2
Motif
Other DBs
NCBI-GeneID:
103149697
NCBI-ProteinID:
XP_007569041
Ensembl:
ENSPFOG00000002768
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHKQLIQITSGSVRLVV
QDSKALVSEWKEPQGKNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVAC
LDITPLGEGGNESTLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYSLSIVSCRLGKDPSVYFIVGTAMVYPEE
PEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLTKVIKSVGKIEHSFWRSFHTER
KTEQGTGFIDGDLIESFLDLSRAKMQEVVSTLLIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataactacgtggtaacagcacagaagcccacggcagtgaacgcctgcatcaca
ggtcacttcacctctgctgaggaccttaatttgctcatcgctaaaaacacacgtctggag
atctatgtggtcacagctgagggacttagacctgtcaaggaagttggcatgtatggcaaa
attgctgtcatggagctcttccgtccaaagggtgagagcaaagacctgctgttcattctc
acatccaagtacaacgcatgtatcctggaatacaaacagaacggggagagtattgacatc
atcacccgtgcccatggcaacgtccaggatcgcattggacgtccatcagaaactgggatt
attgggattgttgacccagaatgccgcatgattggtctgaggctgtacgacggattgttc
aaggtgatcccgttggaccgggacaaccgagagctgaaggcgttcaacatccggctggag
gagctgcaggtcatcgacgttcacttcttgtatggctgccaggctccgaccgtctgcttc
atctaccaggaccctcaaggacgtcatgtaaagacctacgaagtttctctgagagagaag
gagttcaacaagggcccttggaaacaggagaatgtcgaggctgaagcatccatggttatt
ccagtgccagagccatttggtggcgctataatcataggacaagagtcaatcacctaccac
aatggggacaaatacctggccattgctccaccaacaatcaagcaaagtaccattgtctgc
cacaaccgggtggaccccaatgggtcgcgctacctgctgggagacatggagggtcgtctg
ttcatgctgctcctggagaaggaggagctaatggacggcaccgtggctctgaaggacctg
catgtggagctgctgggagagacctctatagctgagtgcttgacctacctggacaatggt
gtggtgtttgttggatccagattgggagactcccagcttgtgaagcttaacgtggacagc
aacgagcagggctcctacgtcacggtaatggagacgttcaccaatctggggcccattgtg
gacatgtgtgtggtggacctggagaggcagggtcagggccagctggtgacatgctctggc
gcgttcaaggagggttctctgcggatcatccgcaacggcattgggattcacgagcatgcc
agcatcgacctgccgggaatcaaaggtttgtggccacttcgctctgaggcaggccgggag
actgatgatatgttggtactgtctttcgtgggtcagacgagagtgttgatgctgagcgga
gaggaggttgaggaaaccgagctgccaggttttgtggacaaccagcagacattttactgt
ggaaatgttgcacacaaacaactcattcagatcacatcaggctctgtgcgcttggtggtc
caggacagcaaggccttggttagtgaatggaaggagccgcagggcaagaacatcagcgta
gccgcctgcaatcatacacaagtggtgctcgctgtgggacgagcattgtactacctgcag
atcctcgcaggagagctcaaacagatcagcaccacagagatggagcatgaggtggcctgc
ctggacatcacacctctgggggagggtggcaacgagtccacgctctgcgctgtgggactg
tggaccgacatctctgcacgtgtgctcaaactgccctgtttcacggctctgcacaaggaa
atgctgggtggagagatcatccctcgctccatcctaatgaccacctttgaaggcagctac
tacctgctgtgtgccctgggagacggagcactcttctactttggtcttgacctacagact
ggagccctcagcgagcgtaagaaggtcactcttggcacgcagcccaccgtgctgcggacc
ttcagatcgctgtccacctcaaacgtcttcgcctgctccgaccggcccactgttatctac
tcatccaaccacaagctggtgttttccaacgtcaatctgaaggaagtcaattacatgtgc
ccactcaactctgagggctacccggacagtctggctttggccaacaacagcacactgacc
atcggcaccattgatgaaattcaaaaactccatattcgcacagttcccctctacgagtct
ccaaggcggatctgttaccaggaggtttcacaatgtttcggggttctgtcgagccgggtg
gagatccaggatgttagcggcaccacgtctgccgtacggcctagtgcaagcacacaggcg
ctctccagcagtgtgagctccagcaagctcttccccagcagcacttctccacatgagacc
tcctttggtgaggaggtggaggttcacagtctgctcgtcgtggatcaacacacctttgaa
gtccttcatgcccatcagttcctccccagcgagtattctctcagcattgtgtcatgtcgc
ctgggaaaagacccatctgtttacttcatcgtcggcacggccatggtttacccagaggag
cccgagcccaagcagggtcgaatcattgtcttccattataccgacgggaagctgcaaacc
gtggctgagaaagaagtgaaaggagccgtctattctatggtggagttcaatggaaaacta
ctggccagcataaatagcacagtccgtctgtacgagtggacggctgagaaggagctgagg
accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaaaggggatttc
atcctggtgggagacctgatgaggtctgtcctgctgctggcgtacaaacccatggagggc
aactttgaagagattgctcgtgactttaatccaaactggatgagtgccgtggaaattcta
gacgatgacaacttcctgggagcagagaacgccttcaacttgttcgtctgccaaaaagat
agtgcggccaccaccgacgaggagcgccagcatctgcaggaggtcggggtctttcaccta
ggcgagtttgtaaatgtcttttgccatggctcactggtgctgcagaacctgggggagagc
tccacacccacccagggatccgtactcttcggcaccgttaacggcatgatcggtctggta
acgtctctgtccgagggctggtacagcctcctgcttgacctacagaaccgcctcaccaag
gtcatcaaaagcgtgggcaagatcgagcacagcttctggaggtctttccacacggagcgc
aagacggagcagggcacaggcttcatcgacggggacctgattgaaagcttcctggatctc
agtcgggcaaagatgcaggaggtcgtcagcactctgctgatcgatgatggcagcggcatg
aagcgtgaagccacagtggacgaggtgattaagatcgtagaggagctgacgaggatccac
tag
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integrated database retrieval system