Poecilia formosa (Amazon molly): 103150337
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Entry
103150337 CDS
T07984
Symbol
smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103150337 (smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103150337 (smarcc1)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103150337 (smarcc1)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103150337 (smarcc1)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103150337 (smarcc1)
PBAF complex
103150337 (smarcc1)
GBAF(ncBAF) complex
103150337 (smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
K_channel_TID
Chromo
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
103150337
NCBI-ProteinID:
XP_016536119
Ensembl:
ENSPFOG00000013003
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MATSATTAGGTGSGGGTAGLVGGGTAVARKKDGGPSTKYWESSETISQLETVRLWIGKHY
KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPPLTKLPAKCFLDFKAGGTLCHILG
SVYKYKSEQGWRRFDLQNPSRMDRNVEMFLNVEKHLVQNNCLTRPLVYLSPEIEQKQVSK
LKDIIKRHQGSVTEDKSKATHHIHPSLTQQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTW
VSAGEVDGDVEDPPSSEKPWKVHAKWVLDTDAFNEWMNEEDYELDENKKPVSFRQRIFPK
EEESSRTPDRKERKANSASKKRRRSPSPPSTPAESRKKGGKKGNPGPHWKRRGHRGEEED
TEEDMTKDMDDSSAGASMEDGVSKNANSKKDSENTPVKGGNMADLDDMEDDSVLSGGKDD
DEQGKGEVNRMDAGEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDAESR
PLPMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPPQPMPNFADKSKDKPIDLQNFGLRPD
LYKKNAKQGKGAGTTREWTEQETLLLLEALEMFKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLESTETSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRV
REEVPAELVEAHVKKVQEAARSTGKVDPTFGLESSGIAGTAPEEPEKTETAEPEKMETDS
DSQQADKAEMKDEAEKPSESAEKSDKTESTEKVKKEGAEGSEHEQEKEEEGETKTASADK
DKDETMDTSSSDQEKEKEDKTATEEGEEKQKKLEHDIGEGNIATAAAAALASAATKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHM
EQLKYAEMKARQQMEQQAAAAAAAAAAAAAQAQGQGSGPGPHPGPPPHGMHHGGPPPHHG
GPPPAHHGGPPPHHGGPPPHHGGPPPGAAMHPGFPPMGHHPMAPHQTGQTGPMEPGQPMP
GRMLSGPPSAGPPPGGIPPMMPPRHPGAPNGMYPGPPPAQPEAMPPAPVAPPAPPSGRVS
DN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcggcgacaacagcaggcgggacgggctcaggcggaggaaccgcgggtctg
gtcggcggcggaacggcggtagcccgaaagaaagacggcggaccttctacgaaatattgg
gaaagttcggaaacaatttctcagcttgagacggtgcgactttggatcggaaagcactac
aagaagtatgtccagaatgactctccatccagtaagtccctggctggcctggtggtccag
ctgcttcagtttcaagaggatgcgtttggacgcagggtcaacaatcctcctcttaccaag
ctacctgccaaatgtttccttgatttcaaggcaggaggaactctctgtcacatcttggga
tcagtatacaagtataaaagtgagcagggctggaggagatttgacctgcagaatccgtct
cggatggaccggaatgtggaaatgttcctaaatgttgaaaaacacctggtccagaataac
tgcctgacacggcccctcgtctacctgtcgccagaaattgagcagaagcaagtcagcaag
ctcaaagacatcatcaagaggcaccagggttcggtcactgaggacaagtcaaaggcaact
catcacattcacccatctttgacgcagcaggaagacgaggagtggctgcgtccggtcatg
aggaaggacaagcaggtcctcgttcactggggcttctacccagacagctatgacacctgg
gtatccgccggtgaggtggatggtgatgtggaagatcctcccagctctgagaaaccctgg
aaggttcatgccaaatgggttttagacacagatgccttcaatgagtggatgaatgaggaa
gactatgagctggacgagaacaaaaagcctgtcagcttccgacagagaatcttccccaaa
gaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggcaaactctgcgagcaag
aagaggaggcgctcgccctcgccgcccagcactccagccgagtcccgaaaaaaaggagga
aagaaggggaacccagggcctcactggaagcgacggggacacagaggagaggaagaggac
actgaggaggacatgacgaaggacatggatgactcctctgctggcgccagcatggaggat
ggtgtgtccaagaatgctaattcaaaaaaagacagtgaaaatactccagtcaagggaggg
aatatggcagatttggatgacatggaggatgattcggtgctgtccggtggcaaggatgat
gatgaacagggcaaaggagaagtcaatcggatggatgctggagaggacaatgtaactgag
cagacgcatcacatcatcattcccagttatgctgcctggttcgactacaacagcatccat
gagattgagaggagagctcttccagagttctttaatgggaagaacaaatccaagactcca
gaaatatacctggcctatcgtaacttcatgatcgacacgtaccggctgaaccctcaggag
tacctgacctccacttcctgtcgcagaaacctgactggggacgtctgtgccatcatgagg
gttcatgcattcctggagcagtggggtttggtaaattaccaggtggatgctgagagtcgg
ccgttacccatgggcccccctcccacgccccacttcactgtgctggctgacactccctct
ggcctcatgcccctcaaccaccggcctccacctattcctcctcctcagccaatgcccaac
tttgcagataagtccaaagacaaaccaattgacttgcagaactttggtctccgccctgac
ctctacaagaaaaacgccaaacagggaaaaggagccggtaccaccagagaatggaccgag
caagagactctgctgctgcttgaggccctggaaatgttcaaagacgactggaacaaagtg
tcggagcatgttggttctcgcacccaagatgaatgtatcctgcacttcctgcggctgccc
attgaggatccgtacctggagagcacagaaacgtctctgggccctctggcctaccagccc
attcccttcagccagtccggaaacccagtaatgagcacagtcgccttcctggcctctgtg
gtggatcccagagtggcgtctgctgcagccaaggcagctttagaggagttttctcgcgtg
cgtgaggaagttcctgccgagttggtggaagctcacgtcaagaaggtccaggaggcagca
aggagcaccggcaaggtggatcccacctttggcctggagagcagcggcatcgcaggaacc
gcaccggaggagcccgaaaaaacagaaaccgcagaaccagaaaagatggaaacagattca
gactcccaacaggctgataaggctgagatgaaggatgaggcggaaaagcccagtgagtcg
gcagagaaaagcgacaagacggagagcacagaaaaggtgaagaaggagggagcagaggga
tcagagcatgaacaggagaaggaggaagaaggagagaccaaaacagcttcagcagataaa
gataaggatgaaactatggacacctcatcttcagatcaagagaaggagaaagaggacaag
acggctactgaggagggagaggaaaagcagaagaagttggagcatgacatcggagaggga
aacatcgccacagcggccgctgctgctctcgcttctgcagccaccaaagccaagcacttg
gcggcggttgaagaaaggaaaattaagtccctggttgcgctgctggtggaaacccagatg
aagaagttggaaatcaagctgaggcacttcgaagagctggagaccatcatggaccgcgaa
aaggaagctctggagcttcagcggcagcagctcctcactgagcgccaggcgttccacatg
gagcagctgaaatacgccgagatgaaggccagacaacagatggagcagcaagccgctgcc
gccgccgccgctgctgctgctgccgctgcccaggctcaaggtcagggctctggacccgga
ccccaccccggaccccctccacatggtatgcatcacggcggacccccgccccaccacggc
ggccctcctcctgctcaccatggaggaccaccgccccaccacggcgggcctcccccccac
catggaggaccgccaccaggtgctgcaatgcatcctgggttccctccaatgggccaccat
cccatggccccccaccagacaggtcagacaggaccgatggaaccgggtcagccgatgcca
ggacggatgctgtccggtccgccctctgccggaccgccaccagggggcattccgcccatg
atgcccccacgtcaccctggagcccccaatggcatgtatcctggccctccacctgcacaa
ccagaggcgatgcctccagctcctgtggctcctccagcgcccccaagtggccgggtgtct
gacaattaa
DBGET
integrated database retrieval system
