Poecilia formosa (Amazon molly): 103150593
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Entry
103150593 CDS
T07984
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103150593 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103150593 (prpf40a)
Spliceosome [BR:
pfor03041
]
Complex A
U1 snRNP components
U1 related factors
103150593 (prpf40a)
Complex B
103150593 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
103150593
NCBI-ProteinID:
XP_007570339
Ensembl:
ENSPFOG00000004792
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MSSTETNNGPSQAAPYAAVPPAAIPPPYMGPPGIPPHFPPMGIPPMAQRPPSMTPLPPGI
MPPGIMPPMAAPPMGQMPSMIPPMIPGMMLPPRIPAATVQPTGPPGVDTTVPAAAAPGTT
SGTNGSPPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWK
EYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTEAAAPGTTAAPTAQADQN
TTAMVTVKEAETAAAVPEEQQSQVTSHQTAEVKAVEAPVTSSESAVVAESKPSVEVKEEE
RPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQ
AFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVWSCV
PERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLD
NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLD
ELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRII
KDILKDKGFLVEVNTSFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKEAAFKTMLKQATPPLEPEASWEEVRERFLKEAAFEDVTLESERKRIFKDFMHV
LEHECQHHHSKTKKHSKKSKKHHRKRSRSRSASESEEEEYHKKKKRSQSKSPSERSSSGE
SERSYKKSKKHKKKGKKRRHKSASPDSDGEKKGRERDGKRERDSEKDKENDKIRGKSRSE
SKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggagacaaataatggcccaagccaggcggcaccttatgcagctgtcccc
cctgctgccataccgcctccatatatgggaccaccaggaataccacctcacttcccaccc
atgggaataccccctatggcgcagcgacctcctagcatgactccactgccacctggaata
atgccaccaggcataatgccaccaatggctgctccgccaatgggacagatgccaagcatg
ataccgcccatgatcccgggaatgatgctgcctcctcggattccagctgcgaccgtacag
ccgacgggaccccctggtgttgacaccacagtccctgcagcagctgcacctggaacaact
agtggaacaaatggatcccctccagaagaacagccaaagaagaaatctgtgtggacagaa
cacaaatctttagatgggaaaacatattattacaatacagaaaccaaacagtccacatgg
gagaaaccggatgaactgaaatctcctgcagagcaaatgctgtctaaatgcccctggaag
gagtacaagtctgacacagggaagccttattattacaactctcagacaaaggagtccaga
tggaccaaacccaaggagctggaggatctggaggctatgatcaaagcagaggagagtgga
acaacagaggctgcggctcctggaacgactgcagctcctacagcgcaggccgatcaaaat
acaaccgccatggtgaccgtaaaggaggcggaaactgcagcggcggtcccagaggagcag
cagtcccaggtgacctcgcatcaaacagctgaggtcaaggctgtggaggcacctgtgact
tcctcagagagcgccgtcgttgcagagagcaaacccagcgtcgaagtcaaagaagaagag
cgacctgaacttcagaagaaaacctataagtggaacacaaaagaagaagccaagcaggcc
ttcaaagagctgctgaaggagaagggtgtttcctcaaactcctcatgggaacaggccatg
aagctgattatcaatgaccctcgctacagtgctcttcccaaactgagcgagaagaagcag
gcgtttaatgcctacaaagtccaaaccgagaaggaggagaaggaagaggccaggattaaa
tacaaggagtccaaagaaaagttccagaggttcttggagaatcatgagaagatgacgtcc
accaccagatacaagaaagcagagcaaatgtttaatgagctggaagtgtggagctgcgtt
cctgagagagacagactggagatctacgaagacgtgttgttctacctggcgaagaaagag
aaggaacaagccaagcagctgaggaagaggaactgggaagctctgaagaacatcctggac
aatatggccaacgtgacatatcgcaccacctggtccgaggcccagcagtatctgctggac
aaccccacgtttgccgaggacgaagagctgcagaatatggataaagaggacgccctcatc
tgttttgaggagcacattcgagctctggagaaggaggaggaagaagacaagcagaagact
ctcctcagggaacggagacggcagcgcaagaacagagagtccttccagaaatttctggat
gagctccatgatcacggccagcttcactccatgtcctcgtggatggagatgtacccgacc
ctgagctctgacatgcgcttcagcagcatgctgggccagcctggttccactcctttggac
ctcttcaaattctacgtggaagacctgaaagcccgttaccacgatgaaaaacgaataatc
aaagatatcctcaaggataaaggcttcctggtggaagtgaacaccagctttgatgacttt
ggatccgttatcagctcagacaagagagccactactctggatgctgggaacataaagctg
gccttcaacagtttactggagaaggctgaagccagagagcgagagcgagagaaggaggag
gcccgcaagatgaagcggaaagaagcagctttcaaaaccatgttgaagcaggccacgccg
ccgctggagccagaggcctcatgggaggaagtcagagaaagattcctgaaagaagctgcc
ttcgaagatgtgacgctggagtcagagaggaagaggatattcaaagatttcatgcatgtt
ctggagcatgaatgccagcatcaccattccaagacaaaaaagcattcaaagaagtccaag
aagcaccacaggaagcgatcacgctctcgatcagcgtcagagtcagaggaggaggagtac
cacaagaagaagaagcgctcccagtccaaatctccctccgagcgttcttctagtggagag
tctgagcgaagctataaaaaatccaagaagcacaagaagaaaggcaagaagaggcgccac
aagtctgcctcaccggactctgacggcgagaagaaaggaagagagcgcgatgggaaacgg
gagcgagattcagagaaggataaagagaacgacaagattcgggggaaatctcgctcagag
tctaaacagaaatctcctaaaaggaaagcagccaaagaggagggtggctgggacacgtca
ggcagtgagctgagtgaaggagagctggagaagagaagaagaactttactggaacagctg
gatgcaccttga
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