Poecilia formosa (Amazon molly): 103151031
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Entry
103151031 CDS
T07984
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfor03009
]
103151031 (ddx55)
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103151031 (ddx55)
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
Pre-60S particles
Helicases
103151031 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SLFN-g3_helicase
SBF_like
Helicase_C_2
Cas3-like_C_2
PRANC
YbjM
Motif
Other DBs
NCBI-GeneID:
103151031
NCBI-ProteinID:
XP_007570921
Ensembl:
ENSPFOG00000006970
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MESGTKTCESALVSPRRVNNCGTQRKKVHRAERPCANSVSVLLLRLLRLLSNMENITDGT
WDSLPVQLNEKILQTLEEMKFTYMTPVQSACIPLFMNNKDVAAEAVTGSGKTLAFVIPII
ELLLKREEKLKKKQVGALVITPTRELALQISEVMGMFIQKFPEFTQILLIGGSNPAEDVE
KFKEHGGNIVIATPGRLEDMFRRKSEGLELASAVRSLDVLVLDEADRLLDMGFEASLNSI
LSYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGQAASATQKTPARLSNYYTI
CRAEDKFNNLVAFLRQHKHEKQLVFFSTCACVEFFGRALESLVKKVTIHCIHGKMKNKRS
SIFSDFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSARAFVHRCGRTARIGNHGNA
LVFLLPMEEPYVNFLSINQKCPLQKMSPIKDVVDVLPKVKAMALADRAMFDKGMRAFVSY
VQAYAKHECSLIFRVKDLDFVSLANGFALLRLPKMPELKGKTFPDFVATTVDTDSIRYKD
KNRQKQRQKMLAELKDKEKTELPKKNFVKNKAWSKQKTKKERRKKRAAKRKHDEDSDMDE
EYMKELLEDTRLLKKLKKGQISEEDFEQQLTNSKQEAGGP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggaaccaaaacatgcgagtcggctttagtttccccccggcgtgtaaacaac
tgcggaacgcagcggaagaaggtccatcgtgcagaaaggccatgtgctaacagcgttagc
gttctgctgctacgtcttcttcgtttactttccaacatggaaaacattacagacgggaca
tgggacagcttacctgttcaactaaacgagaagattttacaaacacttgaggaaatgaaa
tttacttacatgacacctgtacagtctgcttgtattccactgttcatgaacaataaagac
gtggctgctgaggcggtcaccggcagtgggaagactttggcttttgtcattcctattata
gagctgctgctgaagcgcgaggagaaactcaagaagaagcaggtcggtgctctggtgatc
actcccacacgagaactggccctgcagatcagtgaggtgatgggaatgtttattcaaaag
tttccagagttcacgcagattttgctgattggtggcagcaacccagcagaagacgtggag
aagtttaaagagcatggtggcaacattgtgattgcgacgcccggccgcctagaggacatg
ttcaggaggaaatcagaggggctggaactggccagcgcggtccggagcctggatgttctg
gttctggatgaggccgacaggctgcttgacatgggctttgaggccagcctgaacagcatc
ctgagctatctgcccaaacagagacggacgggcctgttctcagccacccagactcaggag
ctggaaaagctggtgagggccggcctcaggaaccccgtccgcatcaccgtcaaagagaag
ggtcaggctgcctcggccacccagaagaccccggcccgtctctccaactactacactatt
tgcagagcagaggacaagttcaacaacctggtggcgtttctaaggcaacacaagcatgag
aagcagctggtcttcttcagcacctgtgcctgtgtggagttcttcggccgagccctggag
tcgctggtcaagaaggtcacgatccactgcatccacggcaagatgaaaaataagcgcagc
agtattttttcagacttcagggccttaaagagcgggatcttggtctgcaccgacgtcatg
gccagaggcatcgacatccccgacgtgaactgggttctacagtacgatccccccagcagc
gccagagcttttgtgcatcgatgcgggagaacagcacgtattggtaaccacggcaacgcc
ctcgtcttcctgctgccaatggaggaaccgtatgtcaacttcttgtccatcaaccagaaa
tgcccgctgcagaagatgtctcctataaaggacgtggtggacgtgctgcccaaggtgaag
gccatggcgctggccgaccgcgccatgttcgacaaaggcatgagggcctttgtgtcgtac
gtccaggcttacgccaaacacgaatgcagcctcatcttcagagtaaaagatctggatttt
gtgtccctggccaacggcttcgcgctgctccgcctgccgaagatgcccgagctgaagggg
aaaacgtttcccgacttcgtggcgacgacggtggacacagacagcatccgctacaaggac
aaaaacagacagaagcagaggcagaagatgctggctgagctgaaagacaaggagaagacg
gagctccccaagaagaacttcgtcaagaacaaggcctggtccaagcagaagaccaagaag
gagcgccggaaaaaacgcgccgccaaaaggaaacacgatgaggactctgacatggacgaa
gaatacatgaaggagcttttagaagacactcgcctccttaagaaactaaaaaaaggccaa
atcagcgaggaagacttcgagcagcagctcacaaactcaaagcaggaagcaggtggaccg
taa
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