Poecilia formosa (Amazon molly): 103151306
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Entry
103151306 CDS
T07984
Name
(RefSeq) collagen alpha-1(XX) chain-like
KO
K24357
collagen type XX alpha
Organism
pfor
Poecilia formosa (Amazon molly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
VWA_2
DUF4959
YjeF_N
Motif
Other DBs
NCBI-GeneID:
103151306
NCBI-ProteinID:
XP_007571351
Ensembl:
ENSPFOG00000019431
UniProt:
A0A087YNF7
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSSHLLASRPSSLRLMLCFLLSIFLLLSSGVHGQGRLKLTVLSEDRLQMKWKEADGPVQG
YKVRVRTMSEEQQPELMLTTTRGRATVAGLDSSQEYSLQVFVLNGTAEKLLAKRRFTLEG
LREEEMIRSGSRENRRKLIPGGSGSGDLDDSTAVLLDLPTVLFPDPTLTTAATITTAEPS
ATESASEYPDEPPEKSTREKRKRKKDKERHSSTVENKEEHGMKQGFPQRKPYECESDAAA
DIMLLVDGSWSIGRTNFRRVRDFLEGLVTPFNIGPNHIQIGLTQYSGDPRTEWHLGNFTT
KEQLLEAVRNFRYKGGNTFTGQALLHVMEENMKPKAGARASAPFFLVLLTDGKSQDDAIA
AANRLKNAGVEIIAVGVKNADEAELRQVASEPVDLNVYNVNDFPLLSKLVARLVHILCRR
IEDRGISKRMEPAPTTQPGLSFPSPTDLRFSQLGSRQVKLHWTNPVQTVQQYRVVYHSAE
SQSPQEVVLSGSESTVLLDGLSSQTLYHISIFPVYTSSVGLALRGTVTTLPLVMPSNLEV
TPSSYSTLQVSWSPAPGATDYMILYSALSDGEPEDAKEEKFSAGQTVVELAGLQPETDYS
VTLYALYDEEPSDPVTSVSRTLPLPAPVGIHFPIVTHSMIKVSWVPGAVDVPGHRITYST
NHGSDIKQMEVKGQNSVVLQSLSSLSRYLVSVQSHFPQGLSATLTSNVTTLKVPSPSDLK
VTNFSGSEITVRWAAAADDVVYYLIKWISLSEGDLRQLKVNGDNEGAILEGVEEDKEYQI
SLSALYGDGAQSEAVAIRYSTLSGGGPSSLSVSEETAVSMLVSWVPPNAHVLQYRVSYTP
LTGAETQDGTVLVPGGHKQVVLESLQPDTRYSILVTAEYRNKEGGSGSAQGKTTSLRVSS
ISVVRSDHSSICLSWRPVLAVDGYRVVMQSVKDKQIKQETVDESTNSYCFNHLEPETLYR
ISVHSLLGSAEGAAVSILHPTAPAPARIPIPPRIYPVHNEVCPEVTIQNGIVKGFNMMEA
FGLTWDAHSSVEGVAAEPFVFNNLPAYTVYRDVQLTQSTKFIHPAGFSPEHTISITFRLL
QDTPKEAFALWQLTDNDFQPKMGVVIDPSSQHLMYFSLDYRGEVQELTFDQPQVHKIFYG
SFHKVHLSVSQVSVSLSVDCQPVGERPARPLGNLPTDGFEMLGKLVKTRGPKSGSAPFQL
QSFEIICNNTWASLDTCCDLPGVRDEESCPAPPYACTCSSNVQGAPGPPGPIGKPGPRGD
KGDKGEQGSKGEVGPPGKAGFEGGLGPVGSIGPRGLTVQGKIGPPGARGEKGDPGRPGVQ
GSPGPPGPKGEEGIPGPRGIRGVEGNIGSPGITGTRGFQGLPGYPGPVGERGPSGPVGPT
GLPGNKGERGEKGEPQSMAMIYQLVTQACEQLVHKEVLKLDMYINEISRKPVPIEEPVGP
PGEPGIPGSRGPPGARGNQGNVGSRGRPGRPGYPGEQGRRGIPGEKGSLGNNVQGPSGIK
GLAGPPGESKPGVPGPKGNDGKPGPPGTTGSLGQPGEIGPRGMCDRSGGCRNIPQQTEDP
YYGYQP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcacctcctcgcatccagaccatcgtctctaaggctaatgctgtgtttcctg
ctcagtatcttcctgctgctgtcctcaggagttcatggccagggtcgtctgaagctgacc
gttctatctgaggaccgattgcagatgaagtggaaggaggccgatggtcccgttcaagga
tacaaagttcgggtcagaacaatgtcagaagagcagcaaccagagctgatgctgaccacc
acccgaggccgagcaacagtggcgggactggactccagtcaggaatactccctccaagtc
ttcgttctgaacgggacggcggagaagcttctggcaaaaaggcgatttaccttggagggt
ctgcgagaggaggagatgatccgcagcggtagccgtgagaaccgtaggaagttgatccca
ggtgggtcgggctcaggggacctggacgattcgacagctgttctgctggacctgccaaca
gtcctgtttccagaccccactctcaccactgctgccaccatcacaactgcagagccctca
gccacagaaagcgcttccgaataccctgatgagccccctgagaaaagcaccagagagaag
aggaagaggaagaaagacaaggagcggcatagttccacggtggaaaacaaggaggagcat
gggatgaaacagggctttccccagaggaagccatatgagtgtgagagtgacgcggcggca
gacatcatgctgttggttgacggctcctggagcatcggacgcaccaacttcaggcgggtc
agagactttctggagggtctggtgacgcctttcaacattggaccaaaccacattcaaatc
gggctgacccagtacagcggagaccctcgcactgagtggcacctcggtaacttcaccacg
aaagagcagctgttggaggcagtgaggaatttcagatacaaaggaggaaacacatttaca
ggacaggcactgctccacgtcatggaggaaaacatgaagcctaaggcaggagcgcgagcc
agtgcaccatttttcctggttctgttgactgatggcaagtctcaggatgatgccattgca
gcagctaaccggctgaagaatgcaggcgtggaaatcatcgctgtaggtgtgaaaaatgct
gatgaagctgaattgaggcaggtggcatcagagccagttgatctgaacgtctacaacgta
aatgatttccccctgctcagcaagctggtcgctcggctggttcacattctgtgcaggagg
atagaggaccgtggcatctcaaaacgaatggagcctgcacccaccacacaaccaggcctc
tcctttcccagtcctactgatctgaggttttcccaacttggatccagacaagtgaagctg
cactggaccaatcctgtccagaccgtccagcagtacagagtggtttaccacagtgctgag
agtcagagtccacaggaggtggttttatctggctctgaatccactgttctgctcgatggc
ctctcctctcagactctctatcacatctccatatttcctgtgtacaccagcagcgttggc
ttggccctcagaggaactgtcactacattgcctctggttatgccatccaacttggaagtg
actccctcctcttacagcactttgcaagtaagttggagtccagctcctggtgcaactgat
tacatgatcctatactcagcactcagcgacggagagcctgaagatgcaaaggaggagaaa
ttcagtgcaggccagacagtggtggagctggcaggcttgcagccagaaacagactactct
gtcactctttatgctctctatgatgaagagcccagtgatccagtcacttcagtctcccgc
acactacccctcccagctccagttggaattcacttcccgattgtaacccacagcatgata
aaggtgagctgggtccctggtgctgtggatgtcccaggccacagaatcacctacagcacc
aatcacggtagtgacattaagcagatggaggtaaaaggccagaactctgtggtgcttcaa
agcctttcatctctgtcccgatacctggtttcagtccagtcccacttcccacaaggcctg
tctgccacactcaccagtaacgtcacaacactgaaggtgccttctccatcagatctcaag
gtgactaatttctcgggcagtgaaattacggtacgctgggcggcagcagcagatgatgtg
gtctattacctcatcaaatggatctctttaagtgaaggagacctgaggcagctgaaggtg
aacggagacaatgaaggagcgatcctggagggagtggaggaggataaagaataccagatc
tctctgtctgcactttatggagatggagctcagagtgaggctgtggccattcgatacagt
accttgtcaggcggaggcccctccagtctatctgtgtcagaagaaactgcagttagcatg
ttggtcagctgggtgcctccaaatgctcatgtcctccagtaccgggtttcttacacacca
ctgaccggagctgagacccaggatggaactgtgttggtccctggtggtcataagcaggtg
gtgctggagtcattgcagccagatacacgttatagcatcttagtcactgcagagtatcgc
aacaaagaaggaggcagcggctcagctcaaggcaaaaccaccagtctgcgtgtgagcagc
ataagcgtcgtcagatcggaccactccagtatctgtttgtcctggaggcccgtgttggcg
gttgatgggtaccgtgttgtcatgcagtcagttaaagacaagcaaataaaacaggaaact
gtggatgagtccaccaacagctactgcttcaaccacctggaacctgaaaccctgtatcgt
atcagcgtgcattcgcttctcggctctgcagagggcgctgccgtctccattctccatcct
acagctccagctccagccagaattcccattcctcctcggatatatcctgtacacaatgaa
gtttgtcctgaagtcaccatccagaatggcatcgttaaaggttttaacatgatggaagcg
tttggtctgacgtgggatgctcactcatcagtggagggagtggcagccgagccctttgtc
ttcaacaatctgcctgcctacaccgtgtacagagatgtgcaactgacacagagcaccaag
tttattcaccctgcaggtttctctccagagcacaccatcagcatcacttttcgcctgctg
caggatacaccaaaggaagcctttgctctctggcagctcactgacaatgacttccagcca
aagatgggagttgtgattgacccttctagccaacatctgatgtacttcagtctggactac
aggggagaagtgcaggagctcacctttgatcagccacaggtccacaagattttctatgga
agttttcacaaggttcacctgtctgtcagccaggtgagcgtctctctgtctgtggactgt
cagcctgttggtgaaaggccagctcgccctctgggaaacctgcccaccgatggattcgag
atgctgggaaaactggtgaaaaccagaggacctaaaagcggctcagccccgttccagcta
cagtcctttgaaatcatctgtaacaacacatgggcttcattggatacttgttgtgacctg
cctggagtgagggatgaggagagctgccctgctccaccgtacgcatgtacctgttcctcc
aacgttcaaggagctccaggaccccctggaccaattgggaaaccaggtcctcgaggggac
aaaggtgataagggagaacagggctcaaagggagaggtgggccccccaggtaaggctgga
tttgaggggggtcttggacctgtgggcagcattggaccccgaggcctaacagttcaaggc
aaaattggtccaccaggagcaaggggagaaaaaggagatcctggcagaccaggagtgcaa
ggttcacctggacctccaggtccaaagggagaagaggggatcccaggccccaggggtatc
agaggtgtggagggaaacattggttccccgggcattacgggaaccaggggtttccaagga
cttccaggatacccaggacctgttggagagaggggtccctctggacctgttggaccaacg
ggtctgccgggaaataaaggggaacgaggtgaaaagggggaaccgcagtctatggccatg
atctatcagctggtgacacaggcctgtgaacaactagttcacaaggaggttttgaagctt
gacatgtacatcaatgagattagtcgaaagcccgttcctattgaggagccggtggggccc
ccaggggagcctggtataccagggtccaggggcccacctggtgccaggggcaaccagggg
aatgttggctcaagagggagacctgggaggccagggtatccaggagagcaaggtcggaga
ggaatccctggagaaaaaggaagtttggggaataatgtccaggggccctcaggaattaaa
gggttggcaggtcctccaggggagtccaagccaggggtcccaggtccaaaaggaaacgac
ggcaaaccagggccaccagggaccactgggagtttgggtcagccaggagagattggacca
cggggcatgtgtgaccgcagtggaggctgtcgaaatattccccaacaaacagaagaccct
tattacggctaccaaccctga
DBGET
integrated database retrieval system