Poecilia formosa (Amazon molly): 103151587
Help
Entry
103151587 CDS
T07984
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03015
mRNA surveillance pathway
pfor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103151587
09123 Folding, sorting and degradation
03018 RNA degradation
103151587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103151587
03041 Spliceosome [BR:
pfor03041
]
103151587
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103151587
mRNA cycle factors
Stress granule specific factors
103151587
Spliceosome [BR:
pfor03041
]
Complex C
Other components
Complex C specific factors
103151587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RBD_RDR6
RRM_occluded
YflT
PABC_AtC3H46
POP1_C
Motif
Other DBs
NCBI-GeneID:
103151587
NCBI-ProteinID:
XP_007571800
Ensembl:
ENSPFOG00000005917
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKFYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGDDMDDEKLRELFSKYGNALSTRVMTDDSGKSRGFGFVSFER
HEDAQKAVDEMNGKDLNGKPIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRA
AYYPAAGQMAQLRPSPRWTTQGVRPQHFQNMTGAMRASAPRPQTFGTMRPANQVPRMMST
QRVAAQTVAPRPPAAATATTAPVRGVPQYKYAAGVRNPQQHITSQSQVNLQQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKTVTNSAVVPSV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgctcccagttatcccatggcctccctatatgtcggggacctgcatcca
gatgtgaccgaggccatgctgtatgagaaattcagcccagccggagccatcctctcgatt
cgggtctgtagggacatgatcacccggcgttccctcggatacgcctatgtcaacttccaa
cagccggcggacgctgagcgcgctctggacaccatgaacttcgacgtgatcaaagggcgg
cccgtacgcatcatgtggtcgcagcgtgatccgtctctgagaaaaagtggcgtgggaaac
atcttcatcaagaatcttgacaagtcgattgacaacaaggctctttatgacaccttctct
gctttcgggaacatcctgtcctgcaaggtggtttgtgatgagaatggctctaagttctac
ggctttgtgcattttgagactcaggaagctgcagaacgagccattgaaaaaatgaacggc
atgctgctcaatgacagaaaagtgttcgttggccgtttcaaatctcgtaaggagcgcgag
gctgagttgggcgcccgggcaaaagagtttactaatgtttacattaaaaactttggtgac
gatatggacgatgagaaattgagagagctcttcagtaaatacggaaatgcgctgagtacc
cgggtcatgacagatgacagcggaaagtccagaggcttcggtttcgtcagctttgaaaga
cacgaagacgcgcagaaggcagtggatgaaatgaacggaaaggacttgaacgggaagccc
atctatgtcggccgcgctcagaagaaggtggaacgacagacggagctgaagcgcaaattt
gagcagatgaaacaagaccgtatgactcgctaccagggtgtcaacttgtatgtgaagaac
cttgatgacgggattgatgatgaacgcttgcggaaggagttctccccgttcggcactatc
accagtgccaaggtcatgatggaaggcggccgcagcaaaggcttcggttttgtctgcttc
tcgtccccggaggaggcgaccaaagccgtgacagagatgaacgggcgcatcgtggccacc
aagccgctgtacgtggctctggctcagaggaaagaggagcgccaagcccacctgaccaac
cagtacatgcagcgcatggccagcgtccgcgccgtgccaaatcccgtcatcaacccctac
cagccagctccgccctccggctacttcatggctgccatacctcaggcccagaaccgcgct
gcctactacccagctgcgggccagatggctcagctgcggccgagcccacgctggacgacc
cagggggtccgacctcaacactttcagaacatgaccggtgccatgcgtgcatcagctcca
cgccctcagaccttcggcaccatgcggcccgcaaatcaggtccctcgcatgatgtccacc
cagcgtgtcgccgctcagaccgtggctccccgaccgcccgccgcagccacggcaacaact
gctccggtgcgcggagttcctcagtacaagtacgccgcaggggtccgcaaccctcagcag
cacatcacctcccagtcacaggtcaatctgcagcagcctgctgtccacgttcagggacag
gagcctctgaccgcctccatgctggccgccgctccgccgcaggaacagaagcagatgctg
ggtgagcgtctgttcccactgatccagaacatgcatcccagcctggcaggcaagattact
ggcatgctgctggagattgacaactcagagctgcttcacatgctggagtccccagagtct
ctccgctccaaggtggacgaggctgtggctgtgctgcaggcccaccaggccaaggaggcc
gctcagaagactgtgactaactcagctgttgtcccaagtgtttga
DBGET
integrated database retrieval system
