Poecilia formosa (Amazon molly): 103153204
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Entry
103153204 CDS
T07984
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103153204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfor03041
]
103153204
03009 Ribosome biogenesis [BR:
pfor03009
]
103153204
Enzymes [BR:
pfor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103153204
Spliceosome [BR:
pfor03041
]
Complex A
U1 snRNP components
U1 related factors
103153204
Complex B
103153204
Ribosome biogenesis [BR:
pfor03009
]
Eukaryotic type
Pre-60S particles
Helicases
103153204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
103153204
NCBI-ProteinID:
XP_007574088
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKRHWNLDELPKFQK
NFYQEHLDVTHRPLQEVEEYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNFTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTIAYLLPAIVHIQHQPFLEHGDGPICLVLAPT
RELAQQVQQVTAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDLEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRFGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRGRGGRGGYRDDRRDRYSGGRSNFGGGGGYRDRDGDRGFGNGPKTAFGGSKAQNGG
NYGGNNSNSSGNYGNSNYSNSNGQGNFSAPPNQGGGAGGFGNQNFQGPPQFGGMQRPAQN
GVNHPPFPFNSQPPPQNQQPPPPPPMVPYPMPPPFPQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttttcagacagagaccggggcagagatagagggtatggtggcggccctcct
cgtttcggtggcggtggaggaggcaacaggggaggacctcctcccggaaagtttggaaac
cccggagaacggctgaggaagagacactggaacctggatgagcttccaaagtttcagaag
aacttctaccaggaacacctggacgtcacacacagacctctgcaagaggttgaagagtat
cggagaagcaaagaagtcacagtgaaaggcagagattgtcccaaaccaattgttaaattc
catgaagctgcttttccaagctacgtcatggatgttattgttaagcagaacttcactgaa
ccgactccaatccagtcccagggctggccagtcgctctgagcggcaaagacatggtgggc
atcgctcaaactggctctgggaaaaccattgcttatcttctgccagcgattgttcacatc
caacatcagccgttcctggagcacggagacggacccatttgcttggttctggcgccgacc
cgggagctggctcagcaggtgcaacaagtgactgctgaatatgggagggcttctcgtctc
aagagtacctgcatctacggtggcgcgcctaaagggccacagataagggacctggagagg
ggagtggagatttgcatcgctactccaggccgtctcatcgattttctggagtgtggtaaa
accaatctgcgtcgttgcacctaccttgtgctggatgaagctgaccgcatgctggacatg
ggctttgaaccgcagatccgcaaaatagtggaacaaattcggcctgatcgtcagactctg
atgtggagcgccacctggcccaaagaggttcgtcagctggctgaggacttcctgaaggat
tacgtccagatcaatattggtgcattgcagctcagtgccaatcataacatcctgcagata
gttgatgtctgcaatgacctggagaaggaggacaagctgatccgtttgttggaggagata
atgagcgaaaaggagaacaagaccatcatctttgtggagaccaaaagacgttgtgatgaa
cttaccaggagaatgagaagagatgggtggccagcaatgggtatccatggagacaagagc
cagcaagagagggactgggttcttaatgagttcagatttggcaaagctccaattctgatt
gctacagacgtggcctcccgtggtttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggactatatccaccgcattggccgcacggcccgcagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaggccagcgacctg
atctctgtgctgcgcgaggctaaccaggccatcaatcccaagctcatccagatggcagag
gacagaggaggtcgcggacgggggggaagaggtggctacagggatgaccgtcgcgatagg
tattcaggcggcagaagtaacttcggtggcggaggcggctacagggacagggacggcgat
agagggttcggcaacgggccgaaaactgcctttgggggaagcaaagcccaaaacggtggg
aattatggaggcaacaatagcaattctagcggtaactatggcaacagcaattacagcaat
agtaacggacagggtaactttagcgcgccaccaaaccaaggcggcggcgctggcggcttc
ggtaaccagaacttccaaggcccccctcagtttggcggcatgcagaggcccgctcagaac
ggcgtgaaccacccgccgttccccttcaactctcagccgccgccacagaaccaacagccg
ccgccaccgccaccaatggtgccctacccgatgccgccgccattccctcagtaa
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