Poecilia formosa (Amazon molly): 103153320
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Entry
103153320 CDS
T07984
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03013
Nucleocytoplasmic transport
pfor03015
mRNA surveillance pathway
pfor03040
Spliceosome
pfor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103153320 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
103153320 (alyref)
03015 mRNA surveillance pathway
103153320 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103153320 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103153320 (alyref)
03041 Spliceosome [BR:
pfor03041
]
103153320 (alyref)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103153320 (alyref)
TREX complex
103153320 (alyref)
Spliceosome [BR:
pfor03041
]
Complex C
Other components
EJC/TREX
103153320 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103153320 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
103153320
NCBI-ProteinID:
XP_007574262
Ensembl:
ENSPFOG00000022825
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MADKMDMSLDEIIKQNRQQRGGGRGGRGRGRGGRVGLGGGRGGGPGRLGGGGGGGGFGGR
GGGSGPMRNRQNLNRARGRPTPYSRPKQLPDKWQHDMFDNGFGGFNGSAGAGGGGGVETG
GKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQ
YNGIPLDGRPMNIQLVTSQIDTQRRPMQGLVVVGGMNRNRTFGMQRGRGGRGSGFFRGRG
RGGGRGGGSKPLSAEELDAQLDAYNARMDTS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatggatatgtctctagatgagattatcaagcagaacaggcagcagaga
ggtggaggccggggaggaagaggccgcggccgaggtggccgtgtaggcttaggcggcggc
cgaggaggaggccccggacgacttggaggcggcggcggcggtggaggatttggaggccga
ggcggcggatccggccccatgaggaatcgacagaacctgaaccgcgctagaggcaggccg
acgccttacagcaggcctaaacagctccccgacaagtggcagcacgacatgttcgacaac
ggcttcggaggctttaatggtagtgccggcgctggcggaggaggtggtgtggaaactgga
gggaagcttctagtctccaatctggacttcggtgtttcagacgcagacattcaggaactt
tttgctgaatttgggactctgaagaaggctgccgttcattacgatcgctcaggaagaagc
ctgggaacagctgatgtccattttgagaggagagcagatgcactgaaggccatgaagcaa
tataatggcatcccacttgacgggcggccaatgaacattcaactcgtcacatcacagatt
gacacacagaggcggcctatgcaggggttggtcgtagtcgggggcatgaacagaaatcgc
acttttggcatgcaaagaggtcgaggcggccgtggttcaggtttcttcagagggagagga
cggggtggtggccgaggtggcggaagcaaaccgctttcagcagaggagcttgatgcacaa
ttagacgcctacaacgccaggatggacaccagttaa
DBGET
integrated database retrieval system