Poecilia formosa (Amazon molly): 103153361
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Entry
103153361 CDS
T07984
Symbol
ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pfor
Poecilia formosa (Amazon molly)
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pfor03037
]
103153361 (ushbp1)
Cilium and associated proteins [BR:
pfor03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103153361 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
103153361
NCBI-ProteinID:
XP_007574315
Ensembl:
ENSPFOG00000011439
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MEDSKRSRCNSLDTSSLFNKDVLSHGDFVTFDPKASEPLIGHEPTPAEVAQCEAEVSTLL
SIIADLNKKMGSLKAPRVDSSSDPGDTRPPRPSRPLVPPDLLSHRLLRSSPESSSASAAA
SKHPATSQGGGGVVWTQLQEVLSSVEDSISFRRTWAAPITASDQNKDTEHLRAAQENWTK
ATQMLEEIERDFGISCSVGMPKEQHLDDFLDLEKHESVLRNNMPSHNDELQRAPSNIFSL
EDEKNKVLHLAGLHKAWRSDRFSPSYRPPSGALSPDRPPPSYPGSPLLHRRTSRAATPLS
LGGDGTPLGCVTPSSPCPSPISLESETDRLNRCIERLKARNERLTAALERRKADSEQISL
KLCRLESDCSALQMALRYSEECEEAYGELLFLYEAKLQQCPPLQIHSAEPVCDMQQSAQN
PEMGTEELSTSFCTAGVTEETQSHTRHRTPDPADREAILRQQIERLKRERAAICPAKPGP
GAEVRLSSETGQAVGTRWGHMMKDNSKPPESKREKASLFYELISVREEMSDLRALIRLKE
KELRCLEWGLMGQKSQEAAGVFIPENLRDEAEDRKTEQRFGENAAKPVNDGEITSSLTRP
ILKELQAVLQREQALKRRLAMVHDSLNSALANGAPHRKDNAEQIARLTQAHSKALSSYRQ
IRRKYREQVWRLEQKVAAMMESQHSQSEAAKAAEEGAEWRKEETIL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccaaaagaagcagatgtaacagccttgataccagctccctgtttaacaag
gatgtgctgagccatggtgactttgtgacctttgaccctaaagcctctgagcctctgatt
ggccatgagcccacaccagcagaggtggctcagtgcgaagcagaagtaagcaccctgctc
agcatcatcgctgatttaaacaagaagatgggatcgctaaaggctccgagggttgactct
tccagtgatccaggagacacgagaccgccacgtccgtccagacctctggttcccccggac
cttctgtctcaccggctgctcagaagcagcccagagagcagctctgcttctgctgccgca
tccaaacatccagcaaccagccaagggggcggtggtgtcgtctggacacaactgcaggag
gttttatcatcggtggaggactccatcagcttcagaaggacgtgggctgctccaatcaca
gcctccgaccagaacaaggacacggagcacctgagagctgctcaggagaactggaccaaa
gccacacagatgctggaggaaatagagagagactttgggatttcatgttctgtgggaatg
ccgaaggagcagcacctggacgacttcttggatctggaaaaacacgagtctgttctcagg
aacaacatgccgagtcacaatgatgagctgcagagagctccaagtaacattttctcactg
gaagacgagaaaaacaaggtgctccacctggctggtctccacaaggcctggaggtctgac
aggttttctccttcataccggcctccttcaggagctctcagtcccgatcgaccgcctcct
tcctaccctggttcacctttactccacagaaggacgtccagagctgcgactcctctgtct
ttgggtggggacgggactccgctgggctgcgtgaccccgagcagtccctgccccagcccc
atcagcctggagtcagagaccgacagactgaatagatgcattgagaggctgaaggccaga
aacgagcgtctgactgcggctctggagcgaaggaaggcggattcggagcaaatcagtcta
aaactgtgtcgactggagtctgactgctctgccctgcagatggctcttagatacagtgag
gagtgtgaggaggcctacggcgagctgctgttcctttatgaagccaagctgcagcaatgc
ccccctctgcagatacactcagcagagccagtgtgtgacatgcagcaatcagctcagaac
ccggagatgggaactgaggagttatccacctctttctgcacagctggagtcacagaggaa
acccagagtcacacgaggcacagaactccagatccagcagaccgggaagcaattctccga
caacaaatcgagcgactgaaaagggaaagggcagccatttgcccagcaaagccaggtcca
ggagccgaggtcagactgagctcagaaaccggtcaagcggtcggtaccagatggggccac
atgatgaaggacaacagcaaacctcctgagagcaagagggagaaagcatcgctgttttat
gagctgatctcagtcagggaggagatgtcagatcttcgagctttaatccgtctgaaggag
aaggagctgcgatgtcttgaatggggcttaatgggacagaagtctcaggaagcagctgga
gttttcattccagaaaacctcagagacgaggcggaagatcggaagaccgaacagaggttt
ggtgaaaacgctgccaaacctgttaatgacggtgaaatcacgagttctctgacccgaccc
attctgaaagagctgcaggctgtcctacagagggaacaagccctgaagagaaggctggcc
atggtccacgactcgctgaactccgctctcgcaaacggcgccccccacaggaaggacaac
gcagagcagatcgctcgactcacacaggcgcacagtaaagctctgagttcctacaggcag
attcgcaggaagtatcgggagcaggtgtggcggctggagcagaaggttgcagccatgatg
gagagtcaacacagccagagcgaagcagccaaagctgcagaggaaggagcagagtggagg
aaggaagagacgattttataa
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