Poecilia formosa (Amazon molly): 103153638
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Entry
103153638 CDS
T07984
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103153638 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfor03021
]
103153638 (taf5l)
03036 Chromosome and associated proteins [BR:
pfor03036
]
103153638 (taf5l)
Transcription machinery [BR:
pfor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103153638 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
103153638 (taf5l)
Chromosome and associated proteins [BR:
pfor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103153638 (taf5l)
STAGA complex
103153638 (taf5l)
TFTC complex
103153638 (taf5l)
SAGA complex
103153638 (taf5l)
SLIK complex
103153638 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
TFIID_NTD2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
PROPPIN
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD_LRWD1
Nbas_N
Beta-prop_WDR75_2nd
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
103153638
NCBI-ProteinID:
XP_007574699
Ensembl:
ENSPFOG00000012282
UniProt:
A0A087Y2N2
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MKRVRAEQIQYAVAQYLKRRQYVDTDSSLKGAKLFQSTEELAAGLTVQTESGYANIVSAA
PCQPDPQQYEVQFSRLRCFLSETEISYAQEVSSLLYPLFIYLHLDMVHCGLKGAVDSFYV
RFHDAFLHDGEQRSVVEQLRHVVTAQDVAANPKLRSFLEHKYVVHLTEPAHSYLLRYLQS
DDNSAICRALSTHLQVEVTASRRTEYQLYGAAAGSMAAANAGSWAGGGGGEGGTEAVEVP
AGIPQNEVALLALQDCIKKVREGPPSLTTICFYAFHHTDQMLNAAEVSPDSRLLAAGFDS
SAVKLWSLRARKLKAKPHQADVSYIHLACDVQEEEVDEEDGCGSEVKMLRGHSGPVYRTA
FLTDSSGLLSCSEDSTIRYWDLGSFTNTVLYQGHGYPVWDLDISPCSLYFASGSHDRTAR
LWTFSRSYPLRLYVGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGQSVRLFTGHRG
AVLALAFSPNGKYLASAGEDQRVKLWDLAAGTLFKELRGHADSITSLSFSPDSSLVASSS
IDNSVRVWDIRSTHGGAPAADGSSGELVGQYVGNTSNVLNVQFMACNLLLVTGTALEKTE
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtccgggccgagcagatccagtacgctgtggctcagtacctgaagaggaga
cagtatgtggatactgacagctccctgaaaggagccaagctcttccagtccacagaagag
ctggctgctggtctgactgtgcagacggagtcgggctatgccaacattgtctctgctgct
ccctgccagcccgacccgcagcagtatgaggtccagttctccaggctccgctgcttcctc
tcagaaacagaaatctcatatgcccaggaggtcagcagcctcctctacccgctcttcatt
tatctccaccttgacatggtgcactgcggcctgaagggggcagtagacagcttctacgtc
cgttttcacgacgcctttcttcacgacggggagcagcggtcggtggtggagcagctccgc
cacgttgtcacggcgcaggacgtcgccgccaatcccaagctgaggtctttcctggagcat
aagtatgtggttcacctgacggagccagcgcacagctacctgctgcgctacctgcagagc
gacgacaacagcgccatctgcagggcgctcagcacacacctgcaggtggaggtcaccgct
tccaggcgaaccgagtaccagctgtacggagccgccgctggctccatggcggccgccaac
gccggctcctgggcgggcggaggcggaggcgagggcggcaccgaggcggtggaggttccc
gccgggatcccgcagaacgaagtggcgcttctggcgctgcaggactgcatcaagaaagtc
cgtgaaggcccgccgtcgctcaccaccatctgcttctacgccttccaccacacggatcag
atgctgaacgcggcagaggtttcgccggacagccggctgctggcggccgggttcgacagc
tccgccgtgaagctgtggagcctccgggccaggaagctgaaggccaaaccgcaccaggcc
gacgtgtcgtacatccacctggcgtgcgacgtgcaagaggaggaggtggacgaggaggac
ggctgcggcagcgaggtgaagatgctgcgtggccacagcggtcccgtctatcgcactgcc
ttcctgaccgacagctccggcctgctgtcctgctccgaggactcgaccatccgctactgg
gacctgggcagcttcaccaatacggtgctgtaccagggccacggctacccggtgtgggac
ctggacatcagcccctgcagtctttacttcgccagcggctcccacgaccgcaccgcccgc
ctctggaccttctcgcgctcctacccgctgcggctctacgtcggccacctgtccgacgtc
gactgcgtcaagttccaccccaactccaactacctggccaccggctccacggacaaaacg
gtgcggctgtggagcacccagcagggccagtcggtgcggctcttcacgggccaccgcggc
gctgtgctggcgctcgccttttcgccgaacgggaagtacctggcgtcggccggcgaggac
cagcgggtgaagctgtgggacctggcagcggggacgctgttcaaagagctgcgcggccac
gcggacagcatcaccagcctgtccttcagcccggacagcagcctggtggcgtcttcctcc
atagacaactccgtccgcgtctgggacatccgcagcacgcacggcggggcgccggctgcc
gacggctcgtccggcgagctggtgggtcagtatgtgggaaacaccagcaacgtcctgaac
gtccagttcatggcctgcaacctgctgctggtcacaggaacggcgctggagaaaaccgag
ccgtag
DBGET
integrated database retrieval system
