Poecilia formosa (Amazon molly): 103154033
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Entry
103154033 CDS
T07984
Symbol
upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
pfor
Poecilia formosa (Amazon molly)
Pathway
pfor03013
Nucleocytoplasmic transport
pfor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103154033 (upf2)
03015 mRNA surveillance pathway
103154033 (upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfor03019
]
103154033 (upf2)
Messenger RNA biogenesis [BR:
pfor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103154033 (upf2)
mRNA cycle factors
P-body specific factors
103154033 (upf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
103154033
NCBI-ProteinID:
XP_007575234
Ensembl:
ENSPFOG00000017118
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MPAESKPSVNMDEKDVNSFSNKEKEKDKEDERRAASARDKAKEEAKASSKKDAGKEEKKK
RLEEEKKKKEEKERKKKEEEKQKAEEDQKKKEEEEKKQQEELQKKLEEDEAKRQREEEAA
LLKEKEEGHQLHQEAWERHQGRKELRSRNQNAQEARPEEAFFSRLDSSLKKNTAFVKKLR
TLTEQQRDALSNDFASLNLSKYIGEAVSSLVEAKLKISDVGCAVHLCSLFHQRYAEFAPL
LLQAWKKHFEARKEDKAPNVSKLRTDLRFIAELTIVGLFTDREGLSLIYEQLKNIIGTDR
ETHTHVSVVISFCKHCGDDIAGLVPRRVKLAAEKFGLAFPPSEIISTEKQQPFQNLLREY
FTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQTLADL
LDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYELEGGIWEDEDARNFYENLIDLKAFVP
AILFKDNEKSGLSKDKDDAKDGREGKDVSATEELELELEALDIADEPLELEGGDEVENEE
LAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRR
KLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLKGDFRFHIRKKDQINIET
KNKTVRFIGELSKFKMFSKTDTLHCLKMLLSDFTHHHIEMACTLLETCGRFLFRSPDSHL
RTSVLLEQMMRKKQAQHLDARYVTMVENAYYYCNPPPIEKAVKKKRPPLQEYIRKLLYKD
LSKVTTEKVLRQMRKLPWQEPEVKGYLICCMINIWNVKYNSIHCVANLLAGLVAYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVVFRTLFSFISFGVN
PDGSPSPLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKKKLDCFLIYFQRYIWWKKSVDVW
TKDHPFPIDIDYMISDTLELLRPKMRLSCSLDDATRQVADLEREVLVKLGMAMEKDGRSS
AMSEGEPLDEEDEDEDEEGAADTEEQSGNESEMNEQEEDEGSENEEEEREEEEEENTDYL
TDSNKENETDEENNEVTIRGGGLKHVACAEDEDFIQALDKMMLENLQQRSGEAVKVHQLD
VAIPLQLKSQLKKGSSGQQCMGEGDSDISDTMQFVMLTRKGNKQQYKILNVPLSSHLAAN
HFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSFAQRPAPANTNRERRPRYQHPKG
APNADLIFKTGGSREKRARIEKHEVQGRQRDRDRKAKQQRQQGQAVE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgagagcaagccctcagtaaacatggatgaaaaagacgtcaactccttcagc
aacaaagaaaaagagaaggacaaagaggatgaacggagggcggcatctgctagagacaag
gctaaagaagaggcgaaagccagcagtaaaaaggatgcaggcaaggaggagaagaaaaag
cgcttagaggaggaaaagaagaagaaggaggaaaaggagcgaaagaagaaagaggaggaa
aagcagaaagcggaggaggatcagaagaagaaagaggaggaggagaagaagcaacaggag
gagctgcagaagaagctcgaagaagatgaggccaaacggcagcgtgaggaagaggcagcg
ctgctcaaggaaaaggaggagggccaccagctgcaccaggaggcctgggaacggcatcag
ggccggaaggagctccgcagccggaaccagaacgcccaggaggcccgacccgaggaggcc
ttcttcagccgcctggactccagcctgaagaagaacacggccttcgtcaagaagctgcgc
acgctgacggagcagcagcgcgatgcgctctccaacgacttcgcctcgctcaacctcagc
aagtacatcggcgaggcggtgagctcgctggtggaggccaagctgaagatctccgacgtg
ggctgcgccgtgcacctgtgctccctgttccaccagcgctacgctgagttcgcgccgctg
ctgctgcaggcctggaagaaacacttcgaggccaggaaggaggacaaggcgcccaatgtg
agcaagctccgcaccgacctgcgcttcatcgccgagctcaccatcgtcggcctgttcacc
gacagggaggggctgtcgctgatctacgagcagctgaagaacatcatcgggacggaccgc
gagacgcacacacacgtgtcggtggtgatcagcttctgcaagcactgcggcgacgacatc
gccggtctggtgccgcgcagggtgaagttggcggcggagaagttcggcctggcgttcccg
ccgagtgagatcatcagcaccgagaagcagcagccgttccagaacctgctgagggaatac
ttcacctccctgaccaaacacctgaagaaggaccaccgggaactgcagaacatcgagagg
cagaaccggcggatcttgcattccaaaggcgagctgagtgaggatcgccacaagcagtac
gaggagttcgccacgtcttaccagaaactgctggccaacacgcagacactggccgacctg
ctggacgaaaacatgccggagctgccgcaggacaagactgtgcaggaagagcacggcccc
ggcatcgacatcttcacccccgggaaacccggagagtacgaactggaaggcggcatctgg
gaggacgaagatgcgcgaaacttctacgaaaacctgatcgacctgaaggctttcgttcct
gccatcctgttcaaggacaacgagaagagcggcctgagcaaagacaaggacgacgccaaa
gatggcagagaagggaaagacgtgagcgccacagaagagctggagctggagctggaggcg
ctggacatcgcagacgagcctctggagctggagggaggagacgaggtggagaacgaggag
ctggccaagaagctgctggatgagcaagagcaagaagacgaggaggccagcaccgggtcg
cacctgaagctgatcgtggacgccttcattcagcagcttcctaactgtgtcaacagagac
ctgatagacaaggccgccatggacttctgcatgaacatgaacaccaagtccaaccggagg
aaattggtccgggccctgttcaccgtccccaggcagaggttggatcttctgcctttctac
tctcgcctggtggcgacgctgcatccctgcatgtcagacgtagccgaggatctttgctcc
atgctgaagggagacttcaggttccatatccgtaagaaggaccagatcaacatcgagacc
aaaaacaaaacggtgcgattcatcggagaactttccaagttcaagatgttctcaaagacc
gacacgctgcactgcctgaagatgctgctgtctgatttcacccaccaccacatcgagatg
gcctgcacactgctggagacctgcggccgcttcctgttccgctcgcccgactctcacctg
cggaccagcgtcctgctggaacaaatgatgcgtaaaaagcaggcgcagcacctggacgcg
cgctacgtcaccatggtggagaacgcctactactactgcaacccgccgcccatcgagaag
gccgtgaagaagaagcggccgccgctgcaggagtacatcaggaagctgctgtacaaggac
ctgtccaaggtcaccacggagaaggtgcttcggcagatgcgcaagctgccgtggcaggag
cccgaggtgaagggctacctgatctgctgcatgatcaacatctggaacgtcaagtacaac
agcatccactgcgtggccaacctgctggccggcctggtggcgtaccaggaggacgtgggc
atccacgtggtggacggcgtcctggaggacatccggctcggcatggaggtcaaccagccc
aagttcaaccagcggcggatcagcagcgccaagttcctgggtgagctctacaactaccgc
atggtggagtcggccgtggtcttccggaccctcttctccttcatctccttcggggtgaac
ccggacggcagccccagcccgctggacccgccggagcacctgttccgcatccggctcgtc
tgcacgctgctcgacacctgcggccagtacttcgaccgcggctccagcaagaagaagctc
gactgtttcctcatctacttccagcgctacatttggtggaagaagagcgtggatgtttgg
acgaaggaccacccgttccccatcgacatcgactacatgatcagcgacacgctggagctg
ctgcggcccaagatgcggctcagctgctcgctggacgacgccaccaggcaggtggccgac
ctggagagggaagttctcgtcaaactgggcatggccatggagaaggacggccgctccagc
gccatgagtgaaggcgagccgctcgatgaggaagacgaggatgaggacgaagagggagcc
gctgacacagaggagcagtcgggcaacgagagcgagatgaacgaacaggaagaggatgaa
ggatctgagaacgaggaagaggagcgtgaggaagaggaggaggagaacacagattacctg
accgactccaacaaggagaacgagacggacgaggagaacaatgaagtgacgatccgcggc
ggaggactgaagcacgtcgcctgcgctgaggacgaagacttcatccaggctctggataag
atgatgctggagaacctgcagcagcgcagcggcgaggcggtgaaggtgcaccagctggac
gtggccatcccgctgcagctgaagagccagctgaagaagggcagctccggccagcagtgc
atgggagagggcgactcggacatctccgacaccatgcagttcgtcatgctcacacgcaaa
ggaaacaagcagcagtataagatcctgaacgtcccgttgtcgtcccacctggcggcgaac
cacttcaaccagcagcaggcggagcaggaggagaggatgaggatgaagaaactcaccctg
gacatcaacgagaggcaggagcaggaagactaccaggagatgatgcagtcgttcgcccag
cgtccggctccggccaacaccaaccgggagcgccggccgcgctaccagcacccgaaaggc
gctcctaacgccgacctcatcttcaaaaccggaggaagcagagagaaaagggcgagaatt
gaaaagcatgaggtccaaggcaggcagagggacagagacaggaaagccaagcagcagaga
cagcagggacaagctgtggaataa
DBGET
integrated database retrieval system
